ggKbase home page

L2_059_000G1_scaffold_441

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_441_1
unknown

Not on your lists

2..100
DNA (99bp) protein (33aa)

This feature has no annotations

L2_059_000G1_scaffold_441_2
unknown

Not on your lists

58..438
DNA (381bp) protein (127aa)

This feature has no annotations

L2_059_000G1_scaffold_441_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

484..6201
DNA (5718bp) protein (1906aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEP0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22808.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted beta-xylosidase
L2_059_000G1_scaffold_441_4
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6238..8079
DNA (1842bp) protein (614aa)
Predicted beta-xylosidase n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4J0Z1_BUTFI
Predicted beta-xylosidase
Predicted beta-xylosidase {ECO:0000313|EMBL:CBK73780.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L2_059_000G1_scaffold_441_5
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8110..10722
DNA (2613bp) protein (871aa)
Bacterial Ig-like domain (Group 2) n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4J0Z2_BUTFI
Bacterial Ig-like domain (group 2).
Bacterial Ig-like domain (Group 2) {ECO:0000313|EMBL:CBK73781.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L2_059_000G1_scaffold_441_6
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10870..11676
DNA (807bp) protein (269aa)
LytTr DNA-binding domain protein n=3 Tax=Clostridiales RepID=B0NGU4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34175.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Response regulator of the LytR/AlgR family
L2_059_000G1_scaffold_441_7
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11878..13362
DNA (1485bp) protein (495aa)
beta-fructofuranosidase (EC:3.2.1.26)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CMW1_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48894.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L2_059_000G1_scaffold_441_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13391..14380
DNA (990bp) protein (330aa)
Sucrose operon repressor n=1 Tax=Clostridium sp. D5 RepID=F0YTU8_9CLOT
Sucrose operon repressor {ECO:0000313|EMBL:EGB94318.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transcriptional regulator
L2_059_000G1_scaffold_441_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14522..15280
DNA (759bp) protein (253aa)
Putative CoA-substrate-specific enzyme activase n=2 Tax=Clostridiales RepID=B0NGU6_CLOSV
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EDS06130.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
(R)-hydroxyglutaryl-CoA dehydratase activator
L2_059_000G1_scaffold_441_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15296..16444
DNA (1149bp) protein (383aa)
2-hydroxyglutaryl-CoA dehydratase, D-component n=2 Tax=Clostridiales RepID=B0NGU7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34173.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
2-hydroxyacyl-CoA dehydratase subunit beta
L2_059_000G1_scaffold_441_11
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16762..17628
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGZ7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06181.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_059_000G1_scaffold_441_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17856..18713
DNA (858bp) protein (286aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:AJG98229.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AJG98229.1};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8Q9_9FIRM
dehydrogenase
L2_059_000G1_scaffold_441_13
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18738..20018
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24Z93_DESHY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE82649.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
L2_059_000G1_scaffold_441_14
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20174..20734
DNA (561bp) protein (187aa)
transcriptional regulator n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000379B264
TetR family transcriptional regulator {ECO:0000313|EMBL:KEZ86625.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
transcriptional regulator
L2_059_000G1_scaffold_441_15
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20949..22880
DNA (1932bp) protein (644aa)
Flavin oxidoreductase/NADH oxidase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGB3_THEPS
nadH2; flavin oxidoreductase/NADH oxidase
Flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:AFV12056.1}; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
L2_059_000G1_scaffold_441_16
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23084..24340
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI000372E746
major facilitator superfamily protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
L2_059_000G1_scaffold_441_17
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24455..24895
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M1Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65084.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
MarR family.
L2_059_000G1_scaffold_441_18
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24909..26240
DNA (1332bp) protein (444aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K3Y8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EOS41134.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Na+-driven multidrug efflux pump
L2_059_000G1_scaffold_441_19
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26400..27002)
DNA (603bp) protein (201aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGU9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06133.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L2_059_000G1_scaffold_441_20
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27216..28844
DNA (1629bp) protein (543aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGV0_CLOSV
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EDS06134.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC-type dipeptide transport system, periplasmic component
L2_059_000G1_scaffold_441_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28844..29839
DNA (996bp) protein (332aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0NGV1_CLOSV
ABC transporter, permease protein {ECO:0000313|EMBL:EDS06135.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
binding-protein-dependent transport system inner membrane protein
L2_059_000G1_scaffold_441_22
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29836..30660
DNA (825bp) protein (275aa)
ABC transporter, permease protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGV2_CLOSV
ABC transporter, permease protein {ECO:0000313|EMBL:EDS06136.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC-type transporter, integral membrane subunit
L2_059_000G1_scaffold_441_23
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30672..31589
DNA (918bp) protein (306aa)
oligopeptide/dipeptide ABC transporter, ATPase subunit (EC:3.6.3.24)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0NGV3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34167.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_059_000G1_scaffold_441_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31678..32298
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KVT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34166.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ABC transporter
L2_059_000G1_scaffold_441_25
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32385..33767
DNA (1383bp) protein (461aa)
MATE efflux family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4H1_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEG72964.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
putative efflux protein, MATE family
L2_059_000G1_scaffold_441_26
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33742..34380
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MI30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70729.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L2_059_000G1_scaffold_441_27
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34452..35570
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGV6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06140.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_059_000G1_scaffold_441_28
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35840..36595
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGW4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06148.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
prdD; PrdD protein
L2_059_000G1_scaffold_441_29
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36626..37111
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NGW5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34157.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
putative uncharacterized protein (PrdE)
L2_059_000G1_scaffold_441_30
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37117..37746
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5H5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72359.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Uncharacterized metal-binding protein conserved in archaea
Displaying items 1-30 of 48 in total

View Taxonomy