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L2_059_000G1_scaffold_454

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_454_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(184..2565)
DNA (2382bp) protein (794aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Phosphoketolase (EC:4.1.2.22)
Probable phosphoketolase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CQF9_9CLOT
L2_059_000G1_scaffold_454_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2839..3567)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P090_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98240.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_059_000G1_scaffold_454_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3691..5103)
DNA (1413bp) protein (471aa)
MATE efflux family protein n=2 Tax=Clostridiales RepID=G9YPT1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM52402.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
MATE efflux family protein
L2_059_000G1_scaffold_454_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5308..5850)
DNA (543bp) protein (181aa)
Uncharacterized protein n=3 Tax=Oscillibacter RepID=U2PTH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK67639.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_000G1_scaffold_454_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5989..6480)
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QCC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65503.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_000G1_scaffold_454_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6656..7189)
DNA (534bp) protein (178aa)
Acetyltransferase, GNAT family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPT0_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EHM52401.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_059_000G1_scaffold_454_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7191..8510)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2C1P3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78435.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_059_000G1_scaffold_454_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8539..11493)
DNA (2955bp) protein (985aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P094_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EDM98244.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
chaperone protein DnaJ
L2_059_000G1_scaffold_454_9
unknown

Not on your lists

11801..12304
DNA (504bp) protein (168aa)

This feature has no annotations

L2_059_000G1_scaffold_454_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12351..13115)
DNA (765bp) protein (255aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Glycosyl hydrolase family 25 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNZ6_9FIRM
glycoside hydrolase family 25
L2_059_000G1_scaffold_454_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13209..15167)
DNA (1959bp) protein (653aa)
Arylsulfatase n=2 Tax=Clostridiales RepID=G9YPS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO28014.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative esterase
L2_059_000G1_scaffold_454_12
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15286..16155)
DNA (870bp) protein (290aa)
Phosphogluconate dehydrogenase (Decarboxylating) NAD binding domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CWL3_9CLOT
Phosphogluconate dehydrogenase (Decarboxylating) NAD binding domain protein {ECO:0000313|EMBL:CDA77249.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
oxidoreductase
L2_059_000G1_scaffold_454_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16270..17019)
DNA (750bp) protein (250aa)
Hemolysin III family channel protein n=2 Tax=Clostridiales RepID=H1CKS5_9FIRM
Hemolysin III family channel protein {ECO:0000313|EMBL:EHO24270.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hemolysin III family channel protein
L2_059_000G1_scaffold_454_14
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17160..17687
DNA (528bp) protein (176aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8RJ83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99490.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Rubrerythrin.
L2_059_000G1_scaffold_454_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17736..18092)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=2 Tax=Clostridiales RepID=G9YMM9_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rplT; 50S ribosomal protein L20
L2_059_000G1_scaffold_454_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18130..18333)
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=3 Tax=Clostridiales RepID=G9YMM8_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
LSU ribosomal protein L35P
L2_059_000G1_scaffold_454_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18391..18834)
DNA (444bp) protein (148aa)
Translation initiation factor IF-3 n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAS4_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
infC; translation initiation factor IF-3
L2_059_000G1_scaffold_454_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19234..21183
DNA (1950bp) protein (650aa)
5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLJ4_9FIRM
5'-nucleotidase protein {ECO:0000313|EMBL:EHM54763.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_059_000G1_scaffold_454_19
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21227..21958
DNA (732bp) protein (244aa)
Methyltransferase domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DQ39_CLOS4
Methyltransferase domain protein {ECO:0000313|EMBL:ERI98593.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Methyltransferase domain.
L2_059_000G1_scaffold_454_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22052..22822)
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0K4_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative RNA polymerase sigma factor
L2_059_000G1_scaffold_454_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23441..24355
DNA (915bp) protein (305aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ76_9FIRM
L2_059_000G1_scaffold_454_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24385..25245
DNA (861bp) protein (287aa)
UPF0042 nucleotide-binding protein HMPREF0372_01239 n=3 Tax=Clostridiales RepID=G9YNZ9_9FIRM
Nucleotide-binding protein HMPREF0372_01239 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_059_000G1_scaffold_454_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25284..26297
DNA (1014bp) protein (338aa)
Putative gluconeogenesis factor n=3 Tax=Clostridiales RepID=G9YP00_9FIRM
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_059_000G1_scaffold_454_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26311..27207
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YP01_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|SAAS:SAAS00015186}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_059_000G1_scaffold_454_25
unknown

Not on your lists

27320..27601
DNA (282bp) protein (94aa)

This feature has no annotations

L2_059_000G1_scaffold_454_26
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27714..31250
DNA (3537bp) protein (1179aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ71_9FIRM
L2_059_000G1_scaffold_454_27
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31247..32782
DNA (1536bp) protein (512aa)
Phospholipase D domain protein {ECO:0000313|EMBL:EDM98719.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDM98719.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Phospholipase D domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ70_9FIRM
hypothetical protein
L2_059_000G1_scaffold_454_28
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32847..33239)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P309_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97310.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_059_000G1_scaffold_454_29
unknown

Not on your lists

33793..34302
DNA (510bp) protein (170aa)

This feature has no annotations

L2_059_000G1_scaffold_454_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34588..35172
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22426.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Displaying items 1-30 of 61 in total

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