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L2_059_000G1_scaffold_473

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_473_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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95..352
DNA (258bp) protein (86aa)
Phosphotransferase System HPr (HPr) Family n=4 Tax=Roseburia RepID=D4L1K6_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CBL13496.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_473_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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399..2024
DNA (1626bp) protein (542aa)
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732, ECO:0000313|EMBL:CBL10265.1};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTR3_9FIRM
L2_059_000G1_scaffold_473_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2363..3625
DNA (1263bp) protein (421aa)
Imidazolonepropionase and related amidohydrolases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1K9_9FIRM
Imidazolonepropionase and related amidohydrolases
Imidazolonepropionase and related amidohydrolases {ECO:0000313|EMBL:CBL13499.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_473_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3727..4596
DNA (870bp) protein (290aa)
Uncharacterized vancomycin resistance protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B2E5_9FIRM
Uncharacterized vancomycin resistance protein {ECO:0000313|EMBL:CDA55159.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Uncharacterized vancomycin resistance protein
L2_059_000G1_scaffold_473_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4756..6282
DNA (1527bp) protein (509aa)
Eco57I restriction endonuclease n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5X0_9FIRM
Eco57I restriction endonuclease {ECO:0000313|EMBL:EEV02852.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted O-methyltransferase
L2_059_000G1_scaffold_473_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6306..7298
DNA (993bp) protein (331aa)
BsuBI/PstI restriction endonuclease C-terminus. (EC:3.1.21.4)
BsuBI/PstI restriction endonuclease C-terminus n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ATB7_9FIRM
BsuBI/PstI restriction endonuclease C-terminus {ECO:0000313|EMBL:CDA55163.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_059_000G1_scaffold_473_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7311..8024
DNA (714bp) protein (238aa)
5'/3'-nucleotidase SurE (EC:3.1.3.5)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
5'-nucleotidase SurE n=2 Tax=Roseburia RepID=D4KTR9_9FIRM
L2_059_000G1_scaffold_473_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8215..9189
DNA (975bp) protein (325aa)
Transcriptional regulator, LacI family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5W7_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEV02849.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
LacI family transcriptional regulator
L2_059_000G1_scaffold_473_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9281..10393
DNA (1113bp) protein (371aa)
Phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1L2_9FIRM
phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
Phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein {ECO:0000313|EMBL:CBL13502.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_473_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10581..11342
DNA (762bp) protein (254aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Phosphonate ABC transporter, ATP-binding protein n=4 Tax=Roseburia RepID=D4KTS1_9FIRM
phosphonate ABC transporter, ATP-binding protein
L2_059_000G1_scaffold_473_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11342..12163
DNA (822bp) protein (274aa)
Phosphonate ABC transporter, permease protein PhnE n=3 Tax=Roseburia RepID=D4KTS2_9FIRM
phosphonate ABC transporter, permease protein PhnE
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:EEV02845.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_059_000G1_scaffold_473_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12178..12987
DNA (810bp) protein (270aa)
Phosphonate ABC transporter, permease protein PhnE n=2 Tax=Roseburia intestinalis RepID=D4KTS3_9FIRM
phosphonate ABC transporter, permease protein PhnE
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:EEV02844.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_059_000G1_scaffold_473_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12991..14478
DNA (1488bp) protein (496aa)
5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterases n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BPH0_9FIRM
5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterases {ECO:0000313|EMBL:CDA55177.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L2_059_000G1_scaffold_473_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14791..16566
DNA (1776bp) protein (592aa)
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Threonine--tRNA ligase n=4 Tax=Roseburia RepID=D4L1L7_9FIRM
L2_059_000G1_scaffold_473_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16801..18201
DNA (1401bp) protein (467aa)
Methyl-accepting chemotaxis protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AVX7_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDA55180.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Methyl-accepting chemotaxis protein
L2_059_000G1_scaffold_473_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18330..20324
DNA (1995bp) protein (665aa)
5'-nucleotidase, C-terminal domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5V8_9FIRM
5'-nucleotidase, C-terminal domain protein {ECO:0000313|EMBL:EEV02840.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L2_059_000G1_scaffold_473_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20327..21106
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02839.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_059_000G1_scaffold_473_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21119..21433
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G5V6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55185.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_059_000G1_scaffold_473_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21456..22523)
DNA (1068bp) protein (356aa)
Cell envelope-related function transcriptional attenuator common domain n=2 Tax=Roseburia intestinalis RepID=D4KTT0_9FIRM
cell envelope-related function transcriptional attenuator common domain
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CBL13512.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_473_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22715..22861
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02836.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_059_000G1_scaffold_473_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22839..23531
DNA (693bp) protein (231aa)
Response regulator receiver domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5V3_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEV02835.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_059_000G1_scaffold_473_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23596..25617
DNA (2022bp) protein (674aa)
Sensor histidine kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AVY7_9FIRM
Sensor histidine kinase {ECO:0000313|EMBL:CDA55190.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Signal transduction histidine kinase
L2_059_000G1_scaffold_473_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25772..28075
DNA (2304bp) protein (768aa)
Aconitase A (EC:4.2.1.3)
Aconitase A {ECO:0000313|EMBL:CBL13516.1}; EC=4.2.1.3 {ECO:0000313|EMBL:CBL13516.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Aconitase A n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1M6_9FIRM
L2_059_000G1_scaffold_473_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28230..29585
DNA (1356bp) protein (452aa)
Predicted permease n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1M7_9FIRM
Predicted permease
Predicted permease {ECO:0000313|EMBL:CBL13517.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_473_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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29748..32414
DNA (2667bp) protein (889aa)
Putative tetratricopeptide repeat-containing domain protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AVZ2_9FIRM
Putative tetratricopeptide repeat-containing domain protein {ECO:0000313|EMBL:CDA55195.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_059_000G1_scaffold_473_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32462..34360
DNA (1899bp) protein (633aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=2 Tax=Roseburia RepID=D4KTT5_9FIRM
L2_059_000G1_scaffold_473_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34607..37816
DNA (3210bp) protein (1070aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1M9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13519.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_473_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37832..38596)
DNA (765bp) protein (255aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=4 Tax=Roseburia RepID=D4KTT7_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDA55200.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_059_000G1_scaffold_473_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38686..40518)
DNA (1833bp) protein (611aa)
Predicted glycosyl hydrolase n=2 Tax=Roseburia intestinalis RepID=D4KTT8_9FIRM
Predicted glycosyl hydrolase
Predicted glycosyl hydrolase {ECO:0000313|EMBL:CBL13521.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_473_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40770..40985)
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G5U4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55204.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Displaying items 1-30 of 54 in total

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