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L2_059_000G1_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_475_1
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..1465)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WDK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07470.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Cell division protein FtsI/penicillin-binding protein 2
L2_059_000G1_scaffold_475_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1525..3381)
DNA (1857bp) protein (619aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI17_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EDM62733.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Cell division protein FtsI/penicillin-binding protein 2
L2_059_000G1_scaffold_475_3
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3406..3900)
DNA (495bp) protein (165aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RWA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80313.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Septum formation initiator.
L2_059_000G1_scaffold_475_4
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3948..4883)
DNA (936bp) protein (312aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B830_9FIRM
L2_059_000G1_scaffold_475_5
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4908..5345)
DNA (438bp) protein (146aa)
Protein MraZ n=2 Tax=Coprococcus RepID=C0B8J2_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
MraZ protein
L2_059_000G1_scaffold_475_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5625..5876)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BQR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17117.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Uncharacterized protein conserved in bacteria (DUF2133).
L2_059_000G1_scaffold_475_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5984..6823)
DNA (840bp) protein (280aa)
EDD domain protein, DegV family n=2 Tax=Clostridium RepID=B6FJ56_9CLOT
EDD domain protein, DegV family {ECO:0000313|EMBL:EEA83948.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
EDD domain protein, DegV family
L2_059_000G1_scaffold_475_8
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6929..8116)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MVS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71902.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Bacterial cell division membrane protein
L2_059_000G1_scaffold_475_9
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8275..8535
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EJ33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB00578.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L2_059_000G1_scaffold_475_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8532..8801
DNA (270bp) protein (90aa)
CotJB protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3V4_9CLOT
CotJB protein {ECO:0000313|EMBL:EGB91368.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L2_059_000G1_scaffold_475_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8805..9071
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJ59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22486.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Mn-containing catalase
L2_059_000G1_scaffold_475_12
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9139..9474
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DBF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX76164.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Sporulation initiation factor Spo0A C terminal.
L2_059_000G1_scaffold_475_13
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

9705..10613
DNA (909bp) protein (303aa)
Recombinase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MG21_9FIRM
Recombinase {ECO:0000313|EMBL:CDB97520.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
recombinase
L2_059_000G1_scaffold_475_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10610..11011
DNA (402bp) protein (134aa)
CotJC protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3V3_9CLOT
CotJC protein {ECO:0000313|EMBL:EGB91367.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Mn-containing catalase
L2_059_000G1_scaffold_475_15
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11111..11398)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B819_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80630.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L2_059_000G1_scaffold_475_16
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11537..12817)
DNA (1281bp) protein (427aa)
Trypsin n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BAW6_9FIRM
Trypsin {ECO:0000313|EMBL:EEG89240.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L2_059_000G1_scaffold_475_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12948..14774)
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Clostridium RepID=B6FJ69_9CLOT
L2_059_000G1_scaffold_475_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14964..16532)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QKM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22497.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cellulosome anchoring protein cohesin subunit
L2_059_000G1_scaffold_475_19
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16675..18003)
DNA (1329bp) protein (443aa)
tRNA synthetase class II (D K and N) n=1 Tax=Blautia sp. CAG:37 RepID=R7JXA6_9FIRM
Nondiscriminating aspartyl-tRNA synthetase {ECO:0000313|EMBL:EXG84991.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
tRNA synthetase class II (D K and N)
L2_059_000G1_scaffold_475_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18387..18743)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KG48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ97511.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_059_000G1_scaffold_475_21
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18866..19417)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NB34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80510.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
ABC transporter permease
L2_059_000G1_scaffold_475_22
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19422..20708)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4D8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72931.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
putative membrane protein
L2_059_000G1_scaffold_475_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20689..21594)
DNA (906bp) protein (302aa)
ABC transporter, drug exporter-1 (DrugE1) family, ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0Z1A3_9CLOT
ABC transporter, drug exporter-1 (DrugE1) family, ATP-binding protein {ECO:0000313|EMBL:EGB92205.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter ATP-binding protein
L2_059_000G1_scaffold_475_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21676..22881)
DNA (1206bp) protein (402aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KRH7_9FIRM
Integral membrane sensor signal transduction histidine kinase
L2_059_000G1_scaffold_475_25
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22869..23543)
DNA (675bp) protein (225aa)
Subtilin biosynthesis regulatory protein SpaR n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6N8P8_9FIRM
Subtilin biosynthesis regulatory protein SpaR {ECO:0000313|EMBL:CDC08408.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
two-component response regulator
L2_059_000G1_scaffold_475_26
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23708..24928
DNA (1221bp) protein (407aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Dorea sp. CAG:105 RepID=R5D3V9_9FIRM
L2_059_000G1_scaffold_475_27
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24997..25854)
DNA (858bp) protein (286aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9LA00_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC10946.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L2_059_000G1_scaffold_475_28
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

26047..26985
DNA (939bp) protein (313aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.272)
Lactate dehydrogenase and related dehydrogenases n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YFE4_9FIRM
Lactate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:CDA15277.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L2_059_000G1_scaffold_475_29
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(26945..27457)
DNA (513bp) protein (171aa)
Lipoprotein signal peptidase (EC:3.4.23.36)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XIM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15348.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L2_059_000G1_scaffold_475_30
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27464..27751)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W883_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07313.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
Displaying items 1-30 of 63 in total

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