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L2_059_000G1_scaffold_516

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_516_1

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comp(3..1031)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9G6L7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX02892.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
Rhs element Vgr family protein
L2_059_000G1_scaffold_516_2
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1024..1692)
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6NUH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09881.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
putative RNA polymerase sigma-I factor
L2_059_000G1_scaffold_516_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1759..2427)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GNY9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93537.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
membrane protein
L2_059_000G1_scaffold_516_4
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2443..3369)
DNA (927bp) protein (309aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BB18_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERI69395.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_059_000G1_scaffold_516_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3370..4041)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GNY7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93535.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_059_000G1_scaffold_516_6
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4080..4793)
DNA (714bp) protein (238aa)
VTC domain protein n=2 Tax=Lachnospiraceae RepID=C9LBK4_BLAHA
VTC domain protein {ECO:0000313|EMBL:EEX20511.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L2_059_000G1_scaffold_516_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5033..6634
DNA (1602bp) protein (534aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:299 RepID=R7AIW9_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD42497.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_059_000G1_scaffold_516_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6852..7688
DNA (837bp) protein (279aa)
Cof-like hydrolase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZGC5_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:CDD42494.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
HAD-superfamily hydrolase, subfamily IIB
L2_059_000G1_scaffold_516_9
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7685..8551
DNA (867bp) protein (289aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5ML39_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCY85971.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
ugpA2; sn-glycerol-3-phosphate transport system permease protein UgpA
L2_059_000G1_scaffold_516_10
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

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8548..9372
DNA (825bp) protein (275aa)
ABC-type sugar transport system, permease component n=2 Tax=Clostridiales RepID=D4MPA9_9FIRM
ABC-type sugar transport system, permease component
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:CBL35595.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L2_059_000G1_scaffold_516_11
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9417..10781
DNA (1365bp) protein (455aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CC07_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFE12753.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
ABC-type sugar transport system, periplasmic component
L2_059_000G1_scaffold_516_12
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10856..11797
DNA (942bp) protein (314aa)
Inosine-uridine nucleoside N-ribohydrolase (EC:3.2.-.-)
Inosine-uridine nucleoside N-ribohydrolase n=1 Tax=Clostridium sp. CAG:149 RepID=R5M353_9CLOT
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:CCY85968.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L2_059_000G1_scaffold_516_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11899..12777
DNA (879bp) protein (293aa)
AP endonuclease family 2 n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z5V4_9CLOT
AP endonuclease family 2 {ECO:0000313|EMBL:CDD38939.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Sugar phosphate isomerases/epimerases
L2_059_000G1_scaffold_516_14
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13040..13465
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T5G4_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97812.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_059_000G1_scaffold_516_15
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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13469..13930
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C7GI74_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40305.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_059_000G1_scaffold_516_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14090..14629
DNA (540bp) protein (180aa)
Riboflavin biosynthesis protein RibD domain-containing protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZB90_9CLOT
Riboflavin biosynthesis protein RibD domain-containing protein {ECO:0000313|EMBL:CDD43465.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
riboflavin biosynthesis protein RibD protein
L2_059_000G1_scaffold_516_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14634..14810
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZQZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43466.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_000G1_scaffold_516_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15048..15551
DNA (504bp) protein (168aa)
Predicted membrane protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7ALL6_9CLOT
Predicted membrane protein {ECO:0000313|EMBL:CDD43467.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted membrane protein
L2_059_000G1_scaffold_516_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15792..17189
DNA (1398bp) protein (466aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z5A0_9CLOT
L2_059_000G1_scaffold_516_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17441..18547
DNA (1107bp) protein (369aa)
DnaD domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZJ55_9CLOT
DnaD domain protein {ECO:0000313|EMBL:CDD43469.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
primosome subunit DnaD
L2_059_000G1_scaffold_516_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18534..19529
DNA (996bp) protein (332aa)
Putative DNA replication protein DnaC n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZB95_9CLOT
Putative DNA replication protein DnaC {ECO:0000313|EMBL:CDD43470.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
replicative DNA helicase loader DnaI
L2_059_000G1_scaffold_516_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19590..20771
DNA (1182bp) protein (394aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZR01_9CLOT
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:CDD43471.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_000G1_scaffold_516_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20916..21968
DNA (1053bp) protein (351aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases n=1 Tax=Clostridium sp. CAG:299 RepID=R7ALM3_9CLOT
Threonine dehydrogenase and related Zn-dependent dehydrogenases {ECO:0000313|EMBL:CDD43472.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L2_059_000G1_scaffold_516_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22059..23933)
DNA (1875bp) protein (625aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YPD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37843.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_059_000G1_scaffold_516_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23937..25007)
DNA (1071bp) protein (357aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A506_9CLOT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDD37842.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
metallophosphoesterase
L2_059_000G1_scaffold_516_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25177..26568)
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZAA8_9CLOT
L2_059_000G1_scaffold_516_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26948..28222
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YVA8_9CLOT
L2_059_000G1_scaffold_516_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28219..29340
DNA (1122bp) protein (374aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z2K7_9CLOT
L2_059_000G1_scaffold_516_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29400..29690
DNA (291bp) protein (97aa)
Putative septation protein SpoVG n=1 Tax=Clostridium sp. CAG:299 RepID=R6YPD2_9CLOT
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Uncharacterized protein, involved in the regulation of septum location
L2_059_000G1_scaffold_516_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29838..30722)
DNA (885bp) protein (295aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:299 RepID=R7A4Z8_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDD37837.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
transcriptional regulator, LysR family
Displaying items 1-30 of 57 in total

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