ggKbase home page

L2_059_000G1_scaffold_550

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_550_1
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

235..2481
DNA (2247bp) protein (749aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJ78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL19889.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
hypothetical protein
L2_059_000G1_scaffold_550_2
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3087..4097
DNA (1011bp) protein (337aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase, putative n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJ79_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_059_000G1_scaffold_550_3
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4117..5910
DNA (1794bp) protein (598aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Blautia sp. KLE 1732 RepID=U2EI74_9FIRM
L2_059_000G1_scaffold_550_4
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5950..7077
DNA (1128bp) protein (376aa)
RNA polymerase sigma factor SigA n=2 Tax=Clostridiales RepID=R7GQ20_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
RNA polymerase, sigma 70 subunit, RpoD
L2_059_000G1_scaffold_550_5
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7070..7798
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GQ84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29191.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Predicted SAM-dependent methyltransferase
L2_059_000G1_scaffold_550_6
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7785..8567
DNA (783bp) protein (261aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Blautia sp. KLE 1732 RepID=U2CPW0_9FIRM
conserved hypothetical protein TIGR00486
L2_059_000G1_scaffold_550_7
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8715..10382
DNA (1668bp) protein (556aa)
Uridine kinase {ECO:0000313|EMBL:CBL19895.1}; EC=2.7.1.48 {ECO:0000313|EMBL:CBL19895.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJ84_9FIRM
L2_059_000G1_scaffold_550_8
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10592..11632
DNA (1041bp) protein (347aa)
selenophosphate synthase (EC:2.7.9.3)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Selenide, water dikinase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJ85_9FIRM
L2_059_000G1_scaffold_550_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12174..13625
DNA (1452bp) protein (484aa)
Transporter n=1 Tax=Blautia sp. KLE 1732 RepID=U2CWF8_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Na+-dependent transporters of the SNF family
L2_059_000G1_scaffold_550_10
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14228..14665)
DNA (438bp) protein (146aa)
Aspartate carbamoyltransferase, regulatory subunit n=3 Tax=Clostridiales RepID=D4LJ87_9FIRM
Aspartate carbamoyltransferase, regulatory subunit
Aspartate carbamoyltransferase regulatory subunit {ECO:0000313|EMBL:CDE33059.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_059_000G1_scaffold_550_11
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14659..15582)
DNA (924bp) protein (308aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N805_9FIRM
L2_059_000G1_scaffold_550_12
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15652..16053)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H061_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33064.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Protein of unknown function (DUF1113).
L2_059_000G1_scaffold_550_13
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16307..17605
DNA (1299bp) protein (433aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:CBL19902.1}; EC=6.3.2.17 {ECO:0000313|EMBL:CBL19902.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJ91_9FIRM
L2_059_000G1_scaffold_550_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17602..18732
DNA (1131bp) protein (377aa)
Prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKZ0_9FIRM
Chorismate mutase {ECO:0000313|EMBL:ERI94863.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_059_000G1_scaffold_550_15
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18755..20074
DNA (1320bp) protein (440aa)
Predicted ATPase (AAA+ superfamily) n=2 Tax=Clostridiales RepID=R7H242_9FIRM
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CDE33068.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Predicted ATPase (AAA+ superfamily)
L2_059_000G1_scaffold_550_16
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20099..21643
DNA (1545bp) protein (515aa)
Exopolyphosphatase (EC:3.6.1.11)
HD domain protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H067_9FIRM
HD domain protein {ECO:0000313|EMBL:CDE33069.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_059_000G1_scaffold_550_17
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21660..23813
DNA (2154bp) protein (718aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Blautia sp. KLE 1732 RepID=U2DDK6_9FIRM
L2_059_000G1_scaffold_550_18
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23941..25104)
DNA (1164bp) protein (388aa)
Predicted hydrolase (Metallo-beta-lactamase superfamily) n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H179_9FIRM
Predicted hydrolase (Metallo-beta-lactamase superfamily) {ECO:0000313|EMBL:CDE33071.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Predicted hydrolase (metallo-beta-lactamase superfamily)
L2_059_000G1_scaffold_550_19
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25614..27293
DNA (1680bp) protein (560aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H4D6_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDE33072.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
diguanylate cyclase (GGDEF) domain
L2_059_000G1_scaffold_550_20
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27280..29184
DNA (1905bp) protein (635aa)
FOG: EAL domain n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H248_9FIRM
FOG: EAL domain {ECO:0000313|EMBL:CDE33073.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
FOG: EAL domain
L2_059_000G1_scaffold_550_21
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29471..31396
DNA (1926bp) protein (642aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA topoisomerase IV subunit B n=2 Tax=Ruminococcus RepID=D4LJA1_9FIRM
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:CDE33075.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_059_000G1_scaffold_550_22
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


31412..33658
DNA (2247bp) protein (749aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H184_9FIRM
L2_059_000G1_scaffold_550_23
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33733..34023
DNA (291bp) protein (97aa)
Nucleotidyltransferase domain protein n=2 Tax=Clostridiales RepID=R7H254_9FIRM
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:CDE33078.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Predicted nucleotidyltransferases
L2_059_000G1_scaffold_550_24
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34010..34420
DNA (411bp) protein (137aa)
Nucleotidyltransferase substrate binding protein HI0074 family n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H139_9FIRM
Nucleotidyltransferase substrate binding protein HI0074 family {ECO:0000313|EMBL:CDE33080.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
nucleotidyltransferase substrate binding protein, HI0074 family
L2_059_000G1_scaffold_550_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35018..35851
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77172.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Mn-dependent transcriptional regulator
L2_059_000G1_scaffold_550_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35862..36695
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77171.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_059_000G1_scaffold_550_27
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36959..41428
DNA (4470bp) protein (1490aa)
Beta-mannanase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RF09_9CLOT
Beta-mannanase {ECO:0000313|EMBL:CCZ39815.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
CpsG; phosphomannomutase
L2_059_000G1_scaffold_550_28
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41750..44503
DNA (2754bp) protein (918aa)
FMN-binding domain./Fibronectin type III domain./Iron Transport-associated domain n=1 Tax=Clostridium sp. CAG:122 RepID=R5RYH5_9CLOT
FMN-binding domain./Fibronectin type III domain./Iron Transport-associated domain {ECO:0000313|EMBL:CCZ39816.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
FMN-binding domain./Fibronectin type III domain./Iron Transport-associated domain.
L2_059_000G1_scaffold_550_29
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44662..48117
DNA (3456bp) protein (1152aa)
Magnesium-protoporphyrin O-methyltransferase BchH subunit n=1 Tax=Clostridium sp. CAG:127 RepID=R5P0F1_9CLOT
Magnesium-protoporphyrin O-methyltransferase BchH subunit {ECO:0000313|EMBL:CCZ09538.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
bchH; magnesium chelatase
L2_059_000G1_scaffold_550_30
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48114..49073
DNA (960bp) protein (320aa)
Magnesium chelatase n=1 Tax=Clostridium sp. CAG:127 RepID=R5PI00_9CLOT
Magnesium chelatase {ECO:0000313|EMBL:CCZ09536.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Mg-chelatase subunit ChlI
Displaying items 1-30 of 36 in total

View Taxonomy