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L2_059_000G1_scaffold_572

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_572_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..647)
DNA (645bp) protein (215aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B187_RUMGN
L2_059_000G1_scaffold_572_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(640..1830)
DNA (1191bp) protein (397aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Tryptophan synthase beta chain n=1 Tax=Clostridium leptum CAG:27 RepID=R6P3S9_9CLOT
tryptophan synthase subunit beta
L2_059_000G1_scaffold_572_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1827..2435)
DNA (609bp) protein (203aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B185_RUMGN
L2_059_000G1_scaffold_572_4
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2432..3214)
DNA (783bp) protein (261aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Clostridium leptum CAG:27 RepID=R6N8E4_9CLOT
L2_059_000G1_scaffold_572_5
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3211..4242)
DNA (1032bp) protein (344aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Anthranilate phosphoribosyltransferase n=1 Tax=Eubacterium sp. 14-2 RepID=S0IVS0_9FIRM
trpD; anthranilate phosphoribosyltransferase
L2_059_000G1_scaffold_572_6
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4424..4600)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MY27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04633.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_059_000G1_scaffold_572_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4742..5845)
DNA (1104bp) protein (368aa)
L-aminopeptidase/D-esterase (EC:3.4.11.19)
Peptidase family T4 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCT1_9CLOT
Peptidase family T4 {ECO:0000313|EMBL:CDD38731.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_000G1_scaffold_572_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5982..6566
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A7L0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38732.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_059_000G1_scaffold_572_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6665..6955)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38733.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_059_000G1_scaffold_572_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7048..8436)
DNA (1389bp) protein (463aa)
Transglutaminase-like enzymes putative cysteine proteases n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z586_9CLOT
Transglutaminase-like enzymes putative cysteine proteases {ECO:0000313|EMBL:CDD38734.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Transglutaminase-like enzymes, putative cysteine proteases
L2_059_000G1_scaffold_572_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8487..9464)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38735.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_059_000G1_scaffold_572_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9578..10510)
DNA (933bp) protein (311aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCT6_9CLOT
L2_059_000G1_scaffold_572_13
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10589..12556)
DNA (1968bp) protein (656aa)
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
DNA ligase n=3 Tax=Clostridium RepID=D6DEQ7_CLOSC
L2_059_000G1_scaffold_572_14
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12676..13476)
DNA (801bp) protein (267aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=3 Tax=Clostridium RepID=D6DEQ5_CLOSC
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CCY82797.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L2_059_000G1_scaffold_572_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13560..14372)
DNA (813bp) protein (271aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXW3_9CLOT
L2_059_000G1_scaffold_572_16
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14386..14934)
DNA (549bp) protein (183aa)
ANTAR domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CDB7_9CLOT
ANTAR domain protein {ECO:0000313|EMBL:EFE12132.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
ANTAR domain-containing protein
L2_059_000G1_scaffold_572_17
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14965..16164)
DNA (1200bp) protein (400aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EFE12133.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EFE12133.1};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Glutamate--ammonia ligase, catalytic domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CDB8_9CLOT
glutamine synthetase, type I
L2_059_000G1_scaffold_572_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16324..17205)
DNA (882bp) protein (294aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Diaminopimelate epimerase n=1 Tax=Clostridium sp. CAG:299 RepID=R7A7P1_9CLOT
diaminopimelate epimerase
L2_059_000G1_scaffold_572_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17358..18215
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38771.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
AraC family transcriptional regulator
L2_059_000G1_scaffold_572_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18224..19351)
DNA (1128bp) protein (376aa)
Sporulation integral membrane protein YtvI n=1 Tax=Clostridium sp. CAG:299 RepID=R6YS18_9CLOT
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:CDD38773.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
sporulation integral membrane protein YtvI
L2_059_000G1_scaffold_572_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19430..20629)
DNA (1200bp) protein (400aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.1)
Aminotransferase class I/II n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z5C6_9CLOT
Aminotransferase class I/II {ECO:0000313|EMBL:CDD38774.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_000G1_scaffold_572_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20662..21981)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38775.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_059_000G1_scaffold_572_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22116..23834)
DNA (1719bp) protein (573aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCX0_9CLOT
L2_059_000G1_scaffold_572_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23865..24128)
DNA (264bp) protein (88aa)
Phosphotransferase System HPr (HPr) Family n=1 Tax=Clostridium sp. CAG:299 RepID=R7A7Q0_9CLOT
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CDD38777.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Phosphotransferase System HPr (HPr) Family
L2_059_000G1_scaffold_572_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24153..25541)
DNA (1389bp) protein (463aa)
YbbR-like protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YS23_9CLOT
YbbR-like protein {ECO:0000313|EMBL:CDD38778.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
YbbR-like protein.
L2_059_000G1_scaffold_572_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25522..26394)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z5D1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38779.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
conserved hypothetical protein TIGR00159
L2_059_000G1_scaffold_572_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26428..27375)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38781.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_059_000G1_scaffold_572_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27372..27800)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YS27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38783.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_059_000G1_scaffold_572_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27999..29219)
DNA (1221bp) protein (407aa)
Efflux ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXY0_9CLOT
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD38785.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type antimicrobial peptide transport system, permease component
L2_059_000G1_scaffold_572_30
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29209..30021)
DNA (813bp) protein (271aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CDD3_9CLOT
ABC-type antimicrobial peptide transport system, ATPase component
Displaying items 1-30 of 56 in total

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