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L2_059_000G1_scaffold_574

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_574_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..92)
DNA (90bp) protein (30aa)
50S ribosomal protein L3 n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037A0376
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
rplC; 50S ribosomal protein L3
L2_059_000G1_scaffold_574_2
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(179..490)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y6C5_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L2_059_000G1_scaffold_574_3
unknown

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comp(1101..1601)
DNA (501bp) protein (167aa)

This feature has no annotations

L2_059_000G1_scaffold_574_4
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(1712..3163)
DNA (1452bp) protein (484aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YS17_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDD31366.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L2_059_000G1_scaffold_574_5
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3911..5002)
DNA (1092bp) protein (364aa)
GDSL family lipase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPT5_CELLD
GDSL family lipase
GDSL family lipase {ECO:0000313|EMBL:ADZ84870.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_059_000G1_scaffold_574_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5203..7980)
DNA (2778bp) protein (926aa)
beta-glucosidase (EC:3.2.1.21)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000382C307
Glycosyl hydrolase family 3 protein {ECO:0000313|EMBL:ERI71421.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L2_059_000G1_scaffold_574_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8355..9164
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05961.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_059_000G1_scaffold_574_8
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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9263..10510
DNA (1248bp) protein (416aa)
Putative transporter n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EPZ6_9FIRM
Putative transporter {ECO:0000313|EMBL:CCX90707.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Permeases of the major facilitator superfamily
L2_059_000G1_scaffold_574_9
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10628..11083)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C3E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58106.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
acetyltransferase
L2_059_000G1_scaffold_574_10
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(11187..12665)
DNA (1479bp) protein (493aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZDI4_9FIRM
L2_059_000G1_scaffold_574_11
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13026..14240
DNA (1215bp) protein (405aa)
Major facilitator superfamily MFS_1 n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AC42_9CLOT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCX36936.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
major facilitator superfamily protein
L2_059_000G1_scaffold_574_12
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14919..16205)
DNA (1287bp) protein (429aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G7T4_9CLOT
Seryl-tRNA synthetase {ECO:0000313|EMBL:CCY11954.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L2_059_000G1_scaffold_574_13
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16255..16596)
DNA (342bp) protein (114aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DH53_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI95673.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
ABC transporter
L2_059_000G1_scaffold_574_14
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16635..17486)
DNA (852bp) protein (284aa)
ParB-like protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AFX1_9CLOT
ParB-like protein {ECO:0000313|EMBL:CCX38251.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
spo0J; Stage 0 sporulation protein J
L2_059_000G1_scaffold_574_15
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(17510..18274)
DNA (765bp) protein (255aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y3Y2_9FIRM
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:CDD28555.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
soj; Sporulation initiation inhibitor protein soj
L2_059_000G1_scaffold_574_16
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18481..19347)
DNA (867bp) protein (289aa)
Putative nucleoid occlusion protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AFT5_9CLOT
Putative nucleoid occlusion protein {ECO:0000313|EMBL:CCX38216.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Spo0J5; transcriptional regulator
L2_059_000G1_scaffold_574_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19454..20002
DNA (549bp) protein (183aa)
Acetyltransferase, GNAT family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR22_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEG94884.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
GNAT family acetyltransferase
L2_059_000G1_scaffold_574_18
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20118..20579)
DNA (462bp) protein (154aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A544_9CLOT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCX38215.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
GCN5 family acetyltransferase
L2_059_000G1_scaffold_574_19
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20736..21476)
DNA (741bp) protein (247aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A8I7_9CLOT
L2_059_000G1_scaffold_574_20
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(21500..23413)
DNA (1914bp) protein (638aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZDG5_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
glucose-inhibited division protein A
L2_059_000G1_scaffold_574_21
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(23461..24825)
DNA (1365bp) protein (455aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
tRNA modification GTPase MnmE n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y3X1_9FIRM
tRNA modification GTPase TrmE
L2_059_000G1_scaffold_574_22
unknown

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comp(25032..25280)
DNA (249bp) protein (83aa)

This feature has no annotations

L2_059_000G1_scaffold_574_23
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25388..26206)
DNA (819bp) protein (273aa)
R3H domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0MXY3_9CLOT
R3H domain protein {ECO:0000313|EMBL:EJF39249.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
single-stranded nucleic acid binding R3H domain-containing protein
L2_059_000G1_scaffold_574_24
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(26289..27362)
DNA (1074bp) protein (358aa)
60Kd inner membrane protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YBD7_9FIRM
60Kd inner membrane protein {ECO:0000313|EMBL:CDD28529.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L2_059_000G1_scaffold_574_25
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27388..27630)
DNA (243bp) protein (81aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Clostridium RepID=A7VRT2_9CLOT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
conserved hypothetical protein TIGR00278
L2_059_000G1_scaffold_574_26
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(27627..28007)
DNA (381bp) protein (127aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
ribonuclease P protein component, eubacterial (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YJ36_9FIRM
L2_059_000G1_scaffold_574_27
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists


comp(28093..28227)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YBD2_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
LSU ribosomal protein L34P
L2_059_000G1_scaffold_574_28
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28676..29977
DNA (1302bp) protein (434aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AB13_9CLOT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
chromosomal replication initiator protein DnaA
L2_059_000G1_scaffold_574_29
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30314..31420
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A8M8_9CLOT
L2_059_000G1_scaffold_574_30
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31501..31722
DNA (222bp) protein (74aa)
S4 domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H1I2_9CLOT
S4 domain protein {ECO:0000313|EMBL:EJF39300.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
Displaying items 1-30 of 52 in total

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