ggKbase home page

L2_059_000G1_scaffold_598

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_598_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..532
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BAS9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC96459.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
membrane-associated protein
L2_059_000G1_scaffold_598_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

581..1945
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z871_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07591.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
two-component system response regulator RteB
L2_059_000G1_scaffold_598_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2290..4728
DNA (2439bp) protein (813aa)
Pyruvate formate-lyase n=2 Tax=Parabacteroides johnsonii RepID=K5Y3B7_9PORP
Putative formate C-acetyltransferase {ECO:0000313|EMBL:EEC96462.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
formate C-acetyltransferase
L2_059_000G1_scaffold_598_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4742..5647
DNA (906bp) protein (302aa)
Glycyl-radical enzyme activating protein family protein n=3 Tax=Parabacteroides RepID=B7BAT3_9PORP
Glycyl-radical enzyme activating protein family {ECO:0000313|EMBL:EKN07593.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
pyruvate-formate lyase-activating enzyme
L2_059_000G1_scaffold_598_5
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5648..6544)
DNA (897bp) protein (299aa)
Anaerobic cobalt chelatase CbiK n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5D8Y4_9PORP
Anaerobic cobalt chelatase CbiK {ECO:0000313|EMBL:CCX76658.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
anaerobic cobalt chelatase CbiK
L2_059_000G1_scaffold_598_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6759..7877)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5Z8W9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07595.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
heme-binding protein FetB
L2_059_000G1_scaffold_598_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7900..9960)
DNA (2061bp) protein (687aa)
TonB-dependent receptor n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BAT6_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EEC96453.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
TonB-dependent receptor
L2_059_000G1_scaffold_598_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10339..12039
DNA (1701bp) protein (567aa)
Aspartate-alanine antiporter n=3 Tax=Parabacteroides RepID=B7BAT7_9PORP
Aspartate-alanine antiporter {ECO:0000313|EMBL:EEC96454.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
transporter
L2_059_000G1_scaffold_598_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12098..13738
DNA (1641bp) protein (547aa)
aspartate aminotransferase (EC:2.6.1.1)
Aspartate 4-decarboxylase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZVZ3_9PORP
Aspartate 4-decarboxylase {ECO:0000313|EMBL:EKN07598.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_059_000G1_scaffold_598_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13919..16165
DNA (2247bp) protein (749aa)
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z8X3_9PORP
Aconitate hydratase {ECO:0000313|EMBL:EKN07600.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_059_000G1_scaffold_598_11
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16372..17631
DNA (1260bp) protein (420aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DF17_9PORP
isocitrate dehydrogenase
L2_059_000G1_scaffold_598_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17667..19010
DNA (1344bp) protein (448aa)
citrate synthase (EC:2.3.3.5)
Citrate synthase n=2 Tax=Parabacteroides johnsonii RepID=B7BAU2_9PORP
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L2_059_000G1_scaffold_598_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19007..19468)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZVZ8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07603.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_059_000G1_scaffold_598_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19455..19688)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=B7BAU4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC96442.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_059_000G1_scaffold_598_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19675..20085)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z8X8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07605.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
N-acetylmuramoyl-L-alanine amidase
L2_059_000G1_scaffold_598_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20270..20500)
DNA (231bp) protein (77aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7BAU7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07606.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_000G1_scaffold_598_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20493..21020)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y3D0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07607.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_000G1_scaffold_598_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21022..21675)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BAU9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC96447.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_059_000G1_scaffold_598_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21731..21847
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YWT5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07609.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_059_000G1_scaffold_598_20
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22383..25358
DNA (2976bp) protein (992aa)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EEC96449.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EEC96449.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BAV1_9PORP
type II site-specific deoxyribonuclease, hsdr family
L2_059_000G1_scaffold_598_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25348..26640
DNA (1293bp) protein (431aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BAV2_9PORP
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EEC96450.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
restriction modification system DNA specificity domain
L2_059_000G1_scaffold_598_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26637..27749
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y3D5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07612.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Glutamate synthase, large subunit
L2_059_000G1_scaffold_598_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27754..29415
DNA (1662bp) protein (554aa)
Type I restriction-modification system, M subunit n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZW09_9PORP
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EKN07613.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
type I restriction-modification protein subunit M
L2_059_000G1_scaffold_598_24
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29604..30053
DNA (450bp) protein (150aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YWT9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77415.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_000G1_scaffold_598_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30207..30386
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BAV8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC96426.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
addiction module killer protein
L2_059_000G1_scaffold_598_26
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30526..30870
DNA (345bp) protein (115aa)
Addiction module antidote protein HigA n=2 Tax=Parabacteroides johnsonii RepID=B7BAW0_9PORP
Addiction module antidote protein HigA {ECO:0000313|EMBL:EEC96428.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
XRE family transcriptional regulator
L2_059_000G1_scaffold_598_27
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30867..31358)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DAY9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77418.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
redoxin domain-containing protein
L2_059_000G1_scaffold_598_28
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31513..31878
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZW15_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07618.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_000G1_scaffold_598_29
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31926..32891)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YWU3_9PORP
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCX77420.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
transcriptional regulator
L2_059_000G1_scaffold_598_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32915..34393
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z8Z3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07620.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
rhamnulose kinase/L-fuculose kinase
Displaying items 1-30 of 43 in total

View Taxonomy