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L2_059_000G1_scaffold_615

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_615_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..891)
DNA (891bp) protein (297aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD7_9FIRM
L2_059_000G1_scaffold_615_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(884..1576)
DNA (693bp) protein (231aa)
Response regulator receiver domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD8_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFB74423.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_059_000G1_scaffold_615_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1724..3517)
DNA (1794bp) protein (598aa)
Na/Pi-cotransporter II-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD9_9FIRM
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EFB74424.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Na/Pi-cotransporter
L2_059_000G1_scaffold_615_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4128..5078
DNA (951bp) protein (317aa)
Putative Phosphate-binding protein PstS 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSE2_9FIRM
Putative Phosphate-binding protein PstS 2 {ECO:0000313|EMBL:EFB74427.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_059_000G1_scaffold_615_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5207..6100
DNA (894bp) protein (298aa)
Phosphate ABC transporter, permease protein PstC n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSE3_9FIRM
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EFB74428.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
L2_059_000G1_scaffold_615_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6093..7001
DNA (909bp) protein (303aa)
Phosphate ABC transporter, permease protein PstA n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSE4_9FIRM
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EFB74429.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phosphate ABC transporter inner membrane subunit PstA
L2_059_000G1_scaffold_615_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7162..7914
DNA (753bp) protein (251aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSE5_9FIRM
L2_059_000G1_scaffold_615_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7926..8600
DNA (675bp) protein (225aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSE6_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phosphate transport system regulatory protein PhoU
L2_059_000G1_scaffold_615_9
unknown

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8732..8998
DNA (267bp) protein (89aa)

This feature has no annotations

L2_059_000G1_scaffold_615_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8911..10362)
DNA (1452bp) protein (484aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJT5_9FIRM
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:EFB77033.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
undecaprenyl-phosphate galactose phosphotransferase
L2_059_000G1_scaffold_615_11
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10606..12522)
DNA (1917bp) protein (639aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G9Y7_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDR46491.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
diguanylate cyclase (GGDEF) domain
L2_059_000G1_scaffold_615_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12665..13885
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74595.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_059_000G1_scaffold_615_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13992..15677
DNA (1686bp) protein (562aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:CBL01967.1}; EC=5.4.2.8 {ECO:0000313|EMBL:CBL01967.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Phosphomannomutase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAV4_9FIRM
L2_059_000G1_scaffold_615_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15682..16587
DNA (906bp) protein (302aa)
mannose-6-phosphate isomerase, type 1 (EC:5.3.1.8)
Mannose-6-phosphate isomerase, type 1 {ECO:0000313|EMBL:CBL01966.1}; EC=5.3.1.8 {ECO:0000313|EMBL:CBL01966.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Mannose-6-phosphate isomerase, type 1 n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAV3_9FIRM
L2_059_000G1_scaffold_615_15
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16790..17602)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2ALG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ25304.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
xylose isomerase domain-containing protein TIM barrel
L2_059_000G1_scaffold_615_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17766..18590)
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74141.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
binding-protein-dependent transport system inner membrane protein
L2_059_000G1_scaffold_615_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18590..19468)
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74142.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
binding-protein-dependent transport system inner membrane protein
L2_059_000G1_scaffold_615_18
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19711..22872)
DNA (3162bp) protein (1054aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ32_9FIRM
Alpha-mannosidase {ECO:0000313|EMBL:KJF39087.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
alpha-mannosidase
L2_059_000G1_scaffold_615_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23474..24790
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ36_9FIRM
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJF39083.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ABC transporter substrate-binding protein
L2_059_000G1_scaffold_615_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24904..27420
DNA (2517bp) protein (839aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74149.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_059_000G1_scaffold_615_21
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27461..28405)
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74152.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
AraC family transcriptional regulator
L2_059_000G1_scaffold_615_22
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28581..29669
DNA (1089bp) protein (363aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ42_9FIRM
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:KJF39079.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
glycosyl hydrolase 88
L2_059_000G1_scaffold_615_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29669..30838
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74154.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Fucose permease
L2_059_000G1_scaffold_615_24
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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30861..31817
DNA (957bp) protein (319aa)
ROK family protein (Putative glucokinase) n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ45_9FIRM
Glucokinase {ECO:0000313|EMBL:KJF39076.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ROK family protein
L2_059_000G1_scaffold_615_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31831..33510
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67847.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_059_000G1_scaffold_615_26
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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33693..36566
DNA (2874bp) protein (958aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SHT0_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CDC54986.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L2_059_000G1_scaffold_615_27
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36570..37085
DNA (516bp) protein (172aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z364_9FIRM
L2_059_000G1_scaffold_615_28
unknown

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37157..38245
DNA (1089bp) protein (363aa)

This feature has no annotations

L2_059_000G1_scaffold_615_29
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38245..39012
DNA (768bp) protein (256aa)
Sortase, SrtB family n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LUK7_9FIRM
sortase, SrtB family
Sortase, SrtB family {ECO:0000313|EMBL:CBL24465.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_059_000G1_scaffold_615_30
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39009..39647
DNA (639bp) protein (213aa)
Pilin isopeptide linkage domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2R4P2_9FIRM
Pilin isopeptide linkage domain protein {ECO:0000313|EMBL:CCZ66097.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Displaying items 1-30 of 41 in total

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