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L2_059_000G1_scaffold_790

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_790_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..360
DNA (360bp) protein (120aa)
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein n=8 Tax=Clostridium difficile RepID=T2V613_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL32088.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_059_000G1_scaffold_790_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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385..927
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD69 RepID=T3A6K1_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE69749.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_059_000G1_scaffold_790_3
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1026..1136
DNA (111bp) protein (37aa)
FtsK/SpoIIIE family protein n=7 Tax=Clostridium difficile RepID=T2V8X4_CLODI
conjugative transposon FtsK_SpoIIIE-related protein
FtsK/SpoIIIE family cell division protein {ECO:0000313|EMBL:EOI44364.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0313.;"
L2_059_000G1_scaffold_790_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1392..1769
DNA (378bp) protein (126aa)
GntR family Transcriptional regulator n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GA94_9FIRM
GntR family Transcriptional regulator {ECO:0000313|EMBL:EFW05102.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Predicted transcriptional regulators
L2_059_000G1_scaffold_790_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1766..2617
DNA (852bp) protein (284aa)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7B7J0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46088.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type multidrug transport system, ATPase component
L2_059_000G1_scaffold_790_6
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2614..3285
DNA (672bp) protein (224aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=C9L602_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX22584.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L2_059_000G1_scaffold_790_7
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3334..4395)
DNA (1062bp) protein (354aa)
Phage integrase SAM-like domain protein n=2 Tax=Lachnospiraceae RepID=C9L5W1_BLAHA
Phage integrase SAM-like domain protein {ECO:0000313|EMBL:EEX22543.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Site-specific recombinase XerD
L2_059_000G1_scaffold_790_8
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4633..5334)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61185.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L2_059_000G1_scaffold_790_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5331..6875)
DNA (1545bp) protein (515aa)
Putative membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0Z0C6_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EGB92547.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L2_059_000G1_scaffold_790_10
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6872..7438)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZCQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ11798.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
Protein of unknown function (DUF1393).
L2_059_000G1_scaffold_790_11
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7435..8031)
DNA (597bp) protein (199aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BEG8_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERI70585.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
GCN5-like N-acetyltransferase
L2_059_000G1_scaffold_790_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8250..10520
DNA (2271bp) protein (757aa)
ATP-dependent protease La (EC:3.4.21.53)
ATP-dependent protease La {ECO:0000313|EMBL:CBL27447.1}; EC=3.4.21.53 {ECO:0000313|EMBL:CBL27447.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
ATP-dependent protease La n=1 Tax=Ruminococcus torques L2-14 RepID=D4M087_9FIRM
L2_059_000G1_scaffold_790_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10582..11322)
DNA (741bp) protein (247aa)
Methyltransferase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XBN1_9CLOT
Methyltransferase {ECO:0000313|EMBL:ENY93293.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L2_059_000G1_scaffold_790_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11537..12868
DNA (1332bp) protein (444aa)
Amino acid permease n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZX89_9CLOT
Amino acid permease {ECO:0000313|EMBL:CDD45696.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
amino acid permease
L2_059_000G1_scaffold_790_15
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12952..13347)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B920_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84870.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
LysM domain.
L2_059_000G1_scaffold_790_16
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13719..14093)
DNA (375bp) protein (125aa)
Transcriptional regulator BlaI/MecI/CopY family n=1 Tax=Dorea sp. CAG:317 RepID=R6WN28_9FIRM
Transcriptional regulator BlaI/MecI/CopY family {ECO:0000313|EMBL:CDD08309.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Penicillinase repressor.
L2_059_000G1_scaffold_790_17
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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14385..15002
DNA (618bp) protein (206aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor n=1 Tax=Dorea sp. CAG:317 RepID=R6WBR6_9FIRM
L2_059_000G1_scaffold_790_18
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15155..15523)
DNA (369bp) protein (123aa)
Ribosomal silencing factor RsfS n=2 Tax=Lachnospiraceae RepID=F7JIZ9_9FIRM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
iojap family protein
L2_059_000G1_scaffold_790_19
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15536..16123)
DNA (588bp) protein (196aa)
Hydrolase HD family n=1 Tax=Dorea sp. CAG:105 RepID=R5D018_9FIRM
Hydrolase HD family {ECO:0000313|EMBL:CCX73515.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
conserved hypothetical protein TIGR00488
L2_059_000G1_scaffold_790_20
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16104..16739)
DNA (636bp) protein (212aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RU73_9FIRM
L2_059_000G1_scaffold_790_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16744..17037)
DNA (294bp) protein (98aa)
RNA-binding protein, YhbY family n=4 Tax=Clostridiales RepID=A7B300_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20232.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
conserved hypothetical protein TIGR00253
L2_059_000G1_scaffold_790_22
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17055..18341)
DNA (1287bp) protein (429aa)
GTPase Obg n=4 Tax=Lachnospiraceae RepID=E9RU75_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Obg family GTPase CgtA
L2_059_000G1_scaffold_790_23
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18479..18763)
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=2 Tax=root RepID=A5Z4H0_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
LSU ribosomal protein L27P
L2_059_000G1_scaffold_790_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18767..19099)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FNG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22154.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted ribosomal protein
L2_059_000G1_scaffold_790_25
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19103..19411)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=3 Tax=Dorea RepID=B0G5M9_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
LSU ribosomal protein L21P
L2_059_000G1_scaffold_790_26
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19520..20317)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K4I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS41171.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Predicted metal-dependent hydrolase of the TIM-barrel fold
L2_059_000G1_scaffold_790_27
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20310..20729)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WBM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08488.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
FOG: CBS domain
L2_059_000G1_scaffold_790_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20763..22082)
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=2 Tax=Clostridium RepID=B6FNG8_9CLOT
L2_059_000G1_scaffold_790_29
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22101..22709)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AI68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90267.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L2_059_000G1_scaffold_790_30
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22786..23277)
DNA (492bp) protein (164aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Dorea sp. CAG:105 RepID=R5D9L5_9FIRM
ybaK/ebsC protein
Displaying items 1-30 of 53 in total

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