ggKbase home page

L2_059_000G1_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 427 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_3_1
unknown

Not on your lists

comp(1..87)
DNA (87bp) protein (29aa)

This feature has no annotations

L2_059_000G1_scaffold_3_2
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191..1000)
DNA (810bp) protein (270aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
Glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LQ18_9PAST
L2_059_000G1_scaffold_3_3
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1030..3111)
DNA (2082bp) protein (694aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
DNA-directed RNA polymerase subunit omega n=1 Tax=Haemophilus influenzae PittHH RepID=A4NKD4_HAEIF
Haemophilus influenzae strain RMHi93 ctg7180000001675, whole genome shotgun sequence {ECO:0000313|EMBL:KIP48772.1}; TaxID=727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae.;"
L2_059_000G1_scaffold_3_4
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3108..5222)
DNA (2115bp) protein (705aa)
Guanosine 3',5'-bis(Pyrophosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:EIJ73685.1}; EC=3.1.7.2 {ECO:0000313|EMBL:EIJ73685.1};; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
Guanosine 3',5'-bis(Pyrophosphate) 3'-pyrophosphohydrolase n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DPP2_HAEHA
guanosine-3',5'-bis 3'-pyrophosphohydrolase
L2_059_000G1_scaffold_3_5
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5295..5561)
DNA (267bp) protein (89aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
DNA-directed RNA polymerase omega subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=7 Tax=Haemophilus RepID=F9GGX0_HAEHA
L2_059_000G1_scaffold_3_6
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5624..6250)
DNA (627bp) protein (209aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
gmk; Guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=2 Tax=Haemophilus RepID=C9MBM5_HAEIF
L2_059_000G1_scaffold_3_7
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6501..7520
DNA (1020bp) protein (340aa)
gapA; Glyceraldehyde-3-phosphate dehydrogenase A (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=656913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae NT127.;"
Glyceraldehyde-3-phosphate dehydrogenase n=5 Tax=Haemophilus RepID=G3P_HAEIN
L2_059_000G1_scaffold_3_8
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7715..9523
DNA (1809bp) protein (603aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Putative long-chain-fatty-acid--CoA ligase n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GUV0_HAEHA
Putative long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EGT76188.1}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
L2_059_000G1_scaffold_3_9
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9561..10349)
DNA (789bp) protein (263aa)
Cof-like hydrolase n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DPE8_HAEHA
Cof-like hydrolase {ECO:0000313|EMBL:EIJ73591.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
haloacid dehalogenase-like protein
L2_059_000G1_scaffold_3_10
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10372..10836)
DNA (465bp) protein (155aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
Endoribonuclease YbeY n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LQ10_9PAST
hypothetical protein
L2_059_000G1_scaffold_3_11
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10838..11920)
DNA (1083bp) protein (361aa)
PhoH-like protein n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LQ09_9PAST
PhoH-like protein {ECO:0000313|EMBL:EHO47179.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
hypothetical protein
L2_059_000G1_scaffold_3_12
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12055..13602
DNA (1548bp) protein (516aa)
Putative uncharacterized protein n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9H0M0_HAEHA
Uncharacterized protein {ECO:0000313|EMBL:EGT79433.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
hypothetical protein
L2_059_000G1_scaffold_3_13
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13778..14776
DNA (999bp) protein (333aa)
Iron-utilization periplasmic protein n=1 Tax=Haemophilus haemolyticus M21639 RepID=F9H877_HAEHA
Iron-utilization periplasmic protein {ECO:0000313|EMBL:EGT79080.1}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
hypothetical protein
L2_059_000G1_scaffold_3_14
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14823..16367
DNA (1545bp) protein (515aa)
Fe3+-transport system permease protein fbpB 2 n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GUV6_HAEHA
Fe3+-transport system permease protein fbpB 2 {ECO:0000313|EMBL:EGT76194.1}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
fbpB2; iron(III)-transport system permease protein FbpB2
L2_059_000G1_scaffold_3_15
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16354..17424
DNA (1071bp) protein (357aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
fbpC2; iron-utilization ATP-binding protein FbpC2 (EC:3.6.3.30)
Fe3+ ions import ATP-binding protein FbpC 2 n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GUV7_HAEHA
L2_059_000G1_scaffold_3_16
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17460..18140)
DNA (681bp) protein (227aa)
Putative D-alanyl-D-alanine carboxypeptidase n=2 Tax=Haemophilus influenzae RepID=A5UB45_HAEIE
D-alanyl-D-alanine carboxypeptidase
Putative D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBY80392.1}; TaxID=866630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae F3031.;"
L2_059_000G1_scaffold_3_17
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18142..19275)
DNA (1134bp) protein (378aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
Succinyl-diaminopimelate desuccinylase n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LQ02_9PAST
N-succinyl-diaminopimelate deacylase
L2_059_000G1_scaffold_3_18
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19303..19647)
DNA (345bp) protein (115aa)
Conserved protein n=1 Tax=Haemophilus influenzae (strain 10810) RepID=E1X938_HAEI1
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CBW28352.1}; TaxID=862964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae (strain 10810).;"
L2_059_000G1_scaffold_3_19
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19782..19949
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Haemophilus haemolyticus RepID=I3DPP1_HAEHA
Uncharacterized protein {ECO:0000313|EMBL:EGT79074.1}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
hypothetical protein
L2_059_000G1_scaffold_3_20
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20035..20313
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DPJ8_HAEHA
Uncharacterized protein {ECO:0000313|EMBL:EIJ73641.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
hypothetical protein
L2_059_000G1_scaffold_3_21
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20345..22225)
DNA (1881bp) protein (627aa)
Chaperone protein HtpG n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GGY4_HAEHA
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
htpG; Chaperone protein HtpG
L2_059_000G1_scaffold_3_22
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22438..22950)
DNA (513bp) protein (171aa)
Arginine transporter permease subunit ArtM n=3 Tax=Haemophilus haemolyticus RepID=F9GUN1_HAEHA
Arginine transporter permease subunit ArtM {ECO:0000313|EMBL:EGT80681.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
opa; opacity protein
L2_059_000G1_scaffold_3_23
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23001..23516)
DNA (516bp) protein (172aa)
Protein SprT n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DPK0_HAEHA
Protein SprT {ECO:0000256|HAMAP-Rule:MF_00746, ECO:0000256|SAAS:SAAS00012266}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
hypothetical protein
L2_059_000G1_scaffold_3_24
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23581..24735)
DNA (1155bp) protein (385aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=656913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae NT127.;"
metK; S-adenosylmethionine synthase (EC:2.5.1.6)
S-adenosylmethionine synthase n=3 Tax=Haemophilus influenzae RepID=A4NA93_HAEI3
L2_059_000G1_scaffold_3_25
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24820..25401)
DNA (582bp) protein (194aa)
anthranilate synthase component II (EC:4.1.3.27)
Putative anthranilate synthase component II n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GIM6_HAEHA
Glutamine amidotransferase, class I {ECO:0000313|EMBL:EIJ73635.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
L2_059_000G1_scaffold_3_26
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25458..26429
DNA (972bp) protein (324aa)
Para-aminobenzoate synthase component I {ECO:0000313|EMBL:EDK11523.1}; EC=2.6.1.85 {ECO:0000313|EMBL:EDK11523.1};; TaxID=374933 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae PittII.;"
para-aminobenzoate synthase component I (EC:2.6.1.85)
Putative aDC synthase n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GIM5_HAEHA
L2_059_000G1_scaffold_3_27
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26429..26995
DNA (567bp) protein (189aa)
Aminotransferase class IV {ECO:0000313|EMBL:CKH17117.1}; EC=4.1.3.38 {ECO:0000313|EMBL:CKH17117.1};; TaxID=727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae.;"
Putative uncharacterized protein n=1 Tax=Haemophilus influenzae (strain 86-028NP) RepID=Q4QLC8_HAEI8
hypothetical protein
L2_059_000G1_scaffold_3_28
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27088..28125
DNA (1038bp) protein (346aa)
ABC transporter, solute-binding protein n=1 Tax=Haemophilus parainfluenzae HK262 RepID=I2JB58_HAEPA
hypothetical protein
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EIJ30881.1}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
L2_059_000G1_scaffold_3_29
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28188..29000)
DNA (813bp) protein (271aa)
Protein FdhD homolog n=1 Tax=Haemophilus influenzae (strain 86-028NP) RepID=FDHD_HAEI8
fdhD; formate dehydrogenase accessory protein
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187}; TaxID=727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae.;"
L2_059_000G1_scaffold_3_30
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29287..29898
DNA (612bp) protein (204aa)
fdnG; Formate dehydrogenase-N, major subunit (EC:1.2.1.2)
Putative formate dehydrogenase/DMSO reductase, domains 1-3 n=1 Tax=Haemophilus haemolyticus M21639 RepID=F9H898_HAEHA
Putative formate dehydrogenase/DMSO reductase, domains 1-3 {ECO:0000313|EMBL:EGT79011.1}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
Displaying items 1-30 of 427 in total

View Taxonomy