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L2_059_000G1_scaffold_1380

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_1380_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2..268
DNA (267bp) protein (89aa)
F5/8 type C domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYS5_9FIRM
F5/8 type C domain protein {ECO:0000313|EMBL:EDS76114.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_1380_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

571..2655
DNA (2085bp) protein (695aa)
Pullulanase, type I {ECO:0000313|EMBL:EDS76111.1}; EC=3.2.1.41 {ECO:0000313|EMBL:EDS76111.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Pullulanase, type I n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYS2_9FIRM
pullulanase
L2_059_000G1_scaffold_1380_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2667..3221
DNA (555bp) protein (185aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Peptidyl-tRNA hydrolase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYS1_9FIRM
pth_spoVC; peptidyl-tRNA hydrolase, stage V sporulation protein spoVC
L2_059_000G1_scaffold_1380_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3230..6655
DNA (3426bp) protein (1142aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Transcription-repair-coupling factor n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYS0_9FIRM
transcription-repair coupling factor
L2_059_000G1_scaffold_1380_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6799..7884)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS76108.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_059_000G1_scaffold_1380_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7871..8332)
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYR8_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDS76107.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Transcriptional regulators
L2_059_000G1_scaffold_1380_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8728..9540)
DNA (813bp) protein (271aa)
Multidrug-efflux transporter 2 regulator n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYR7_9FIRM
Multidrug-efflux transporter 2 regulator {ECO:0000313|EMBL:EDS76106.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
MerR family transcriptional regulator
L2_059_000G1_scaffold_1380_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9623..10243
DNA (621bp) protein (207aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5U538_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66241.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_059_000G1_scaffold_1380_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10415..10735)
DNA (321bp) protein (107aa)
UPF0145 protein CLOSPI_00068 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYR4_9FIRM
UPF0145 protein CLOSPI_00068 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_059_000G1_scaffold_1380_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10887..11345)
DNA (459bp) protein (153aa)
DUTP diphosphatase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYR1_9FIRM
DUTP diphosphatase {ECO:0000313|EMBL:EDS76100.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_1380_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11398..11997)
DNA (600bp) protein (200aa)
Putative YigZ family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYR0_9FIRM
Putative YigZ family protein {ECO:0000313|EMBL:EDS76099.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_059_000G1_scaffold_1380_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12094..12975
DNA (882bp) protein (294aa)
EDD domain protein, DegV family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ9_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EDS76098.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
degV.1; DegV family protein
L2_059_000G1_scaffold_1380_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12963..13409
DNA (447bp) protein (149aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
LuxS protein involved in autoinducer AI2 synthesis (EC:4.4.1.21)
S-ribosylhomocysteinase LuxS n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ8_9FIRM
L2_059_000G1_scaffold_1380_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13512..15068)
DNA (1557bp) protein (519aa)
Putative ATP synthase F0, A subunit n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ7_9FIRM
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EDS76096.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Group I intron
L2_059_000G1_scaffold_1380_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15183..15638
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ6_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDS76095.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
marR; MarR family transcriptional regulator
L2_059_000G1_scaffold_1380_16
unknown

Not on your lists

comp(15617..15784)
DNA (168bp) protein (56aa)

This feature has no annotations

L2_059_000G1_scaffold_1380_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15802..16431)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS76094.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_1380_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16398..17504)
DNA (1107bp) protein (369aa)
ComF operon protein 1 {ECO:0000313|EMBL:EDS76093.1}; EC=3.6.4.12 {ECO:0000313|EMBL:EDS76093.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ComF operon protein 1 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ4_9FIRM
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
L2_059_000G1_scaffold_1380_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17773..17970
DNA (198bp) protein (66aa)
murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC:2.5.1.7)
Cold-shock DNA-binding domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ3_9FIRM
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EDS76092.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_1380_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18185..18916
DNA (732bp) protein (244aa)
PHP domain protein {ECO:0000313|EMBL:EDS76091.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDS76091.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
PHP domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ2_9FIRM
phosphotransferase domain-containing protein
L2_059_000G1_scaffold_1380_21
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19327..21960
DNA (2634bp) protein (878aa)
Protein translocase subunit SecA n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ1_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
secA1; Protein translocase subunit SecA 1
L2_059_000G1_scaffold_1380_22
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21960..23063
DNA (1104bp) protein (368aa)
Peptide chain release factor 2 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ0_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
prfB; peptide chain release factor 2
L2_059_000G1_scaffold_1380_23
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23065..23946
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS76088.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ypjC; membrane protein YpjC
L2_059_000G1_scaffold_1380_24
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23965..24159)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS76087.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_1380_25
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24338..25021
DNA (684bp) protein (228aa)
Cell division ATP-binding protein FtsE n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP7_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EDS76086.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ftsE; cell division ATP-binding protein FtsE
L2_059_000G1_scaffold_1380_26
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25021..25932
DNA (912bp) protein (304aa)
Cell division protein FtsX n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP6_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ftsX; cell-division protein
L2_059_000G1_scaffold_1380_27
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25986..26660
DNA (675bp) protein (225aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP5_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDS76084.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
GCN5-like N-acetyltransferase
L2_059_000G1_scaffold_1380_28
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26672..28030
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS76083.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
transglutaminase
L2_059_000G1_scaffold_1380_29
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28036..29811)
DNA (1776bp) protein (592aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS76082.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ATPase components of ABC transporters with duplicated ATPase domains
L2_059_000G1_scaffold_1380_30
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29936..30214
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS76081.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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