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L2_059_000G1_scaffold_2239

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_2239_1
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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1..339
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXM9_SPHGB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY12079.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
L2_059_000G1_scaffold_2239_2
Campylobacter sp. RM16704, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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655..2643
DNA (1989bp) protein (663aa)
Uncharacterized protein n=3 Tax=Fusobacterium nucleatum RepID=S2L082_FUSNP
restriction endonuclease, AlwI family
Restriction endonuclease, AlwI family {ECO:0000313|EMBL:AJC87004.1}; TaxID=1500960 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter sp. RM16704.;"
L2_059_000G1_scaffold_2239_3
Leptotrichia sp. oral taxon 879, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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2729..4681
DNA (1953bp) protein (651aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1227268 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 879 str. F0557.;"
DNA adenine methylase n=1 Tax=Leptotrichia sp. oral taxon 879 str. F0557 RepID=U2QFR3_9FUSO
DNA adenine methylase
L2_059_000G1_scaffold_2239_4
Mogibacterium sp. CM50, Mogibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4696..6843
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Mogibacterium sp. CM50 RepID=J5WIT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJU22262.1}; TaxID=936375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis; Mogibacterium.;" source="Mogibacterium sp. CM50.;"
PHP domain.
L2_059_000G1_scaffold_2239_5
unknown

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6827..7126
DNA (300bp) protein (100aa)

This feature has no annotations

L2_059_000G1_scaffold_2239_6
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7471..7794
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJ87_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42499.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L2_059_000G1_scaffold_2239_7
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7809..9131
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036A1860
Multidrug transporter MATE {ECO:0000313|EMBL:KHS57002.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
MATE efflux family protein
L2_059_000G1_scaffold_2239_8
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9861..10847
DNA (987bp) protein (329aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ASX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20719.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Virulence protein
L2_059_000G1_scaffold_2239_9
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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10865..12220
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TVM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC71951.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L2_059_000G1_scaffold_2239_10
unknown

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comp(12358..12582)
DNA (225bp) protein (75aa)

This feature has no annotations

L2_059_000G1_scaffold_2239_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12595..13116
DNA (522bp) protein (174aa)
Transposase, IS4 family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C560_9FIRM
Transposase, IS4 family {ECO:0000313|EMBL:EDS73804.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Transposase DDE domain.
L2_059_000G1_scaffold_2239_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13208..13417
DNA (210bp) protein (70aa)
Transposase, IS4 family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C560_9FIRM
Transposase, IS4 family {ECO:0000313|EMBL:EDS73804.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Transposase DDE domain.
L2_059_000G1_scaffold_2239_13
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13728..14204
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AKU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46907.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L2_059_000G1_scaffold_2239_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14719..15015
DNA (297bp) protein (99aa)
Transposase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VHF9_CLOSH
Uncharacterized protein {ECO:0000313|EMBL:KGM99627.1}; TaxID=1443128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. DC5.;"
transposase family protein
L2_059_000G1_scaffold_2239_15
Veillonella montpellierensis, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15424..18552
DNA (3129bp) protein (1043aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=T5LF99_9FIRM
DNA helicase {ECO:0000313|EMBL:KGF47433.1}; TaxID=1401067 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella montpellierensis DNF00314.;"
hypothetical protein
L2_059_000G1_scaffold_2239_16
unknown

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18506..18625
DNA (120bp) protein (40aa)

This feature has no annotations

L2_059_000G1_scaffold_2239_17
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19488..19616)
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium A2 RepID=R9K6M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS41993.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L2_059_000G1_scaffold_2239_18
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19703..20053)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZLL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64809.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
flavin oxidoreductase
L2_059_000G1_scaffold_2239_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20175..20324
DNA (150bp) protein (50aa)
Putative HTH-type transcriptional activator HxlR n=2 Tax=Oscillibacter RepID=U2R6R7_9FIRM
Putative HTH-type transcriptional activator HxlR {ECO:0000313|EMBL:ERK64234.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
MarR family transcriptional regulator
Displaying 19 items

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