ggKbase home page

L2_059_000G1_scaffold_2525

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_2525_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

245..478
DNA (234bp) protein (78aa)
Acyl carrier protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y4_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
acyl carrier protein
L2_059_000G1_scaffold_2525_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

596..1036
DNA (441bp) protein (147aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y3_9FIRM
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EDS73727.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L2_059_000G1_scaffold_2525_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1042..2394
DNA (1353bp) protein (451aa)
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:EDS73726.1}; EC=6.3.4.14 {ECO:0000313|EMBL:EDS73726.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
cfiB; 2-oxoglutarate carboxylase small subunit (EC:6.4.1.7)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y2_9FIRM
L2_059_000G1_scaffold_2525_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2398..3270
DNA (873bp) protein (291aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
accD; acetyl-CoA carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y1_9FIRM
L2_059_000G1_scaffold_2525_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3270..4220
DNA (951bp) protein (317aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y0_9FIRM
L2_059_000G1_scaffold_2525_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4213..4674
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X9_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDS73723.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
MarR family transcriptional regulator
L2_059_000G1_scaffold_2525_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4683..5624
DNA (942bp) protein (314aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X8_9FIRM
L2_059_000G1_scaffold_2525_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5628..6560
DNA (933bp) protein (311aa)
Dioxygenases related to 2-nitropropane dioxygenase (EC:1.3.1.-)
Putative enoyl-[acyl-carrier-protein] reductase II n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X7_9FIRM
Putative enoyl-[acyl-carrier-protein] reductase II {ECO:0000313|EMBL:EDS73721.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_2525_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6563..7627
DNA (1065bp) protein (355aa)
Oxidoreductase, 2-nitropropane dioxygenase family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X6_9FIRM
Oxidoreductase, 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:EDS73720.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
2-nitropropane dioxygenase family oxidoreductase
L2_059_000G1_scaffold_2525_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7627..8559
DNA (933bp) protein (311aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X5_9FIRM
malonyl CoA-ACP transacylase
L2_059_000G1_scaffold_2525_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8561..9313
DNA (753bp) protein (251aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EDS73718.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EDS73718.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X4_9FIRM
L2_059_000G1_scaffold_2525_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9325..10566
DNA (1242bp) protein (414aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X3_9FIRM
L2_059_000G1_scaffold_2525_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10570..10995
DNA (426bp) protein (142aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X2_9FIRM
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
L2_059_000G1_scaffold_2525_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11081..11260)
DNA (180bp) protein (60aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N8B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33532.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_059_000G1_scaffold_2525_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11358..12524
DNA (1167bp) protein (389aa)
Purine catabolism regulatory protein-like family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X1_9FIRM
Purine catabolism regulatory protein-like family {ECO:0000313|EMBL:EDS73715.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
transcriptional regulator
L2_059_000G1_scaffold_2525_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12546..13487)
DNA (942bp) protein (314aa)
Putative TIGR03943 family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X0_9FIRM
Putative TIGR03943 family protein {ECO:0000313|EMBL:EDS73714.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
G3E family GTPase-like protein
L2_059_000G1_scaffold_2525_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13487..14479)
DNA (993bp) protein (331aa)
CobW/P47K family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4W9_9FIRM
CobW/P47K family protein {ECO:0000313|EMBL:EDS73713.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
cobalamin synthesis protein, P47K
L2_059_000G1_scaffold_2525_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14640..15227
DNA (588bp) protein (196aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS73712.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_2525_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15454..17226
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS73711.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_059_000G1_scaffold_2525_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17312..17467
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS73710.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_2525_21
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17457..18542
DNA (1086bp) protein (362aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=4 Tax=Erysipelotrichaceae RepID=B0N846_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDS17984.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
D-alanyl-D-alanine carboxypeptidase
Displaying 21 items

View Taxonomy