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L2_059_000G1_scaffold_3073

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_3073_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1..135)
DNA (135bp) protein (45aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3K2_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDS74236.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_3073_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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348..1064
DNA (717bp) protein (239aa)
Chain length determinant protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3K1_9FIRM
Chain length determinant protein {ECO:0000313|EMBL:EDS74235.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
lipopolysaccharide biosynthesis protein
L2_059_000G1_scaffold_3073_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1064..1825
DNA (762bp) protein (254aa)
PHP domain protein {ECO:0000313|EMBL:EDS74234.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDS74234.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
PHP domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3K0_9FIRM
capsular polysaccharide biosynthesis protein
L2_059_000G1_scaffold_3073_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1826..2554
DNA (729bp) protein (243aa)
ywqD; Tyrosine-protein kinase YwqD (EC:2.7.10.2)
Capsular exopolysaccharide family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3J9_9FIRM
Capsular exopolysaccharide family {ECO:0000313|EMBL:EDS74233.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_3073_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2561..3571
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74232.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
multidomain protein with s-layer
L2_059_000G1_scaffold_3073_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3661..4218
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3J7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74231.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_3073_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4218..4886
DNA (669bp) protein (223aa)
Sortase family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3J6_9FIRM
Sortase family protein {ECO:0000313|EMBL:EDS74230.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
LPXTG-site transpeptidase (sortase) family protein
L2_059_000G1_scaffold_3073_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4888..5709
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74229.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_059_000G1_scaffold_3073_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5792..6058)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3J2_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rpsO; 30S ribosomal protein S15
L2_059_000G1_scaffold_3073_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6176..6916)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74224.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_059_000G1_scaffold_3073_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6904..7674)
DNA (771bp) protein (257aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3I9_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDS74223.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
4Fe-4S dicluster domain protein
L2_059_000G1_scaffold_3073_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7623..8819)
DNA (1197bp) protein (399aa)
Glycerate kinase {ECO:0000313|EMBL:EDS74222.1}; EC=2.7.1.31 {ECO:0000313|EMBL:EDS74222.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3I8_9FIRM
L2_059_000G1_scaffold_3073_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8837..9487)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74221.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_059_000G1_scaffold_3073_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9601..10224)
DNA (624bp) protein (208aa)
HAD hydrolase, family IA, variant 1 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3I6_9FIRM
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:EDS74220.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
phosphatase
L2_059_000G1_scaffold_3073_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10436..10933)
DNA (498bp) protein (166aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Shikimate kinase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3I5_9FIRM
hypothetical protein
L2_059_000G1_scaffold_3073_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10940..12058)
DNA (1119bp) protein (373aa)
Chorismate mutase {ECO:0000313|EMBL:EDS74218.1}; EC=5.4.99.5 {ECO:0000313|EMBL:EDS74218.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Prephenate dehydratase (EC:4.2.1.51)
Chorismate mutase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3I4_9FIRM
L2_059_000G1_scaffold_3073_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12061..13128)
DNA (1068bp) protein (356aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
aroC; chorismate synthase AroC (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3I3_9FIRM
L2_059_000G1_scaffold_3073_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13106..14386)
DNA (1281bp) protein (427aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3I2_9FIRM
L2_059_000G1_scaffold_3073_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14388..15446)
DNA (1059bp) protein (353aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3I1_9FIRM
L2_059_000G1_scaffold_3073_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15465..15629)
DNA (165bp) protein (55aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EDS74214.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EDS74214.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYV5_9FIRM
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