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L2_059_000G1_scaffold_3315

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_3315_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(176..1294)
DNA (1119bp) protein (373aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EDS74316.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EDS74316.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Methionine synthase, vitamin-B12 independent n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3T2_9FIRM
vitamin-B12 independent methionine synthase
L2_059_000G1_scaffold_3315_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1406..2308)
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3T1_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDS74315.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Transcriptional regulator
L2_059_000G1_scaffold_3315_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2354..2869)
DNA (516bp) protein (172aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3S8_9FIRM
L2_059_000G1_scaffold_3315_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2903..3622)
DNA (720bp) protein (240aa)
RNA polymerase sigma factor n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3S7_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
sigF; RNA polymerase sigma-F factor
L2_059_000G1_scaffold_3315_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3615..4049)
DNA (435bp) protein (145aa)
Anti-sigma F factor {ECO:0000313|EMBL:EDS74310.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EDS74310.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
anti-sigma regulatory factor, serine/threonine protein kinase (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3S6_9FIRM
L2_059_000G1_scaffold_3315_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4049..4372)
DNA (324bp) protein (108aa)
Anti-sigma factor antagonist n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3S5_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
spoIIAA; anti-sigma F factor antagonist
L2_059_000G1_scaffold_3315_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4528..5670
DNA (1143bp) protein (381aa)
dacF; D-alanine-D-alanine carboxypetidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3S3_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDS74308.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_3315_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6372..6746)
DNA (375bp) protein (125aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3S1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS74305.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_3315_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6787..7266)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74304.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_3315_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7333..8589)
DNA (1257bp) protein (419aa)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EDS74303.1}; EC=2.4.2.2 {ECO:0000313|EMBL:EDS74303.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Pyrimidine-nucleoside phosphorylase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3R9_9FIRM
pyn2; Pyrimidine-nucleoside phosphorylase (PYNP)
L2_059_000G1_scaffold_3315_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8635..9588)
DNA (954bp) protein (318aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3R8_9FIRM
methionyl-tRNA formyltransferase
L2_059_000G1_scaffold_3315_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9604..9888)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74301.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_059_000G1_scaffold_3315_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9888..10625)
DNA (738bp) protein (246aa)
Stage II sporulation protein P n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3R6_9FIRM
Stage II sporulation protein P {ECO:0000313|EMBL:EDS74300.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
stage II sporulation protein P
L2_059_000G1_scaffold_3315_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10677..11651)
DNA (975bp) protein (325aa)
GPR endopeptidase {ECO:0000313|EMBL:EDS74299.1}; EC=3.4.24.78 {ECO:0000313|EMBL:EDS74299.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
gpr; germination protease Gpr (EC:3.4.24.78)
GPR endopeptidase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3R5_9FIRM
L2_059_000G1_scaffold_3315_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


11780..12040
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3R4_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
SSU ribosomal protein S20P
L2_059_000G1_scaffold_3315_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12078..13853
DNA (1776bp) protein (592aa)
Oligoendopeptidase F {ECO:0000313|EMBL:EDS74297.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDS74297.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Oligoendopeptidase F n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3R3_9FIRM
oligoendopeptidase F
L2_059_000G1_scaffold_3315_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14044..14625)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74292.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Displaying 17 items

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