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L2_059_011G1_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_011G1_scaffold_39_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..193
DNA (192bp) protein (64aa)
Cadmium efflux system accessory protein n=40 Tax=Staphylococcus RepID=D3QEC7_STALH
bacterial regulatory , arsR family protein
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EES35593.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_059_011G1_scaffold_39_2
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3340..3894)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis NIHLM001 RepID=J1C277_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ14638.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_059_011G1_scaffold_39_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4004..4615)
DNA (612bp) protein (204aa)
Uncharacterized protein n=21 Tax=Staphylococcus epidermidis RepID=Q5HRW8_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58625.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_059_011G1_scaffold_39_4

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comp(4814..4930)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis NIHLM001 RepID=J1C1Z1_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ16291.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_39_5

Not on your lists

comp(5605..6465)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis NIHLM001 RepID=J0RRI6_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ37971.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
bacterial regulatory helix-turn-helix , lysR family protein
L2_059_011G1_scaffold_39_6
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6585..7136
DNA (552bp) protein (184aa)
Trp repressor binding protein {ECO:0000313|EMBL:CDR59566.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDR59566.1};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=J0XXD2_STAEP
NADPH-dependent FMN reductase family protein
L2_059_011G1_scaffold_39_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7441..8469
DNA (1029bp) protein (343aa)
Perfringolysin O regulator protein n=5 Tax=Staphylococcus epidermidis RepID=J0IGC1_STAEP
Regulatory protein PfoR
Perfringolysin O regulator protein {ECO:0000313|EMBL:AAW53484.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_059_011G1_scaffold_39_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8984..9367
DNA (384bp) protein (128aa)
Uncharacterized protein n=50 Tax=Staphylococcus epidermidis RepID=Q5HRW3_STAEQ
hypothetical protein
Glyoxalase family protein {ECO:0000313|EMBL:EFE58629.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_059_011G1_scaffold_39_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9538..10740
DNA (1203bp) protein (401aa)
Cobalamin synthesis protein, putative n=42 Tax=Staphylococcus epidermidis RepID=Q5HRW2_STAEQ
COG0523: Putative GTPases (G3E family)
Cobalamin synthesis protein, putative {ECO:0000313|EMBL:AAW53494.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_059_011G1_scaffold_39_10

Not on your lists

12313..13809
DNA (1497bp) protein (499aa)
NADH dehydrogenase subunit 5 n=16 Tax=Staphylococcus epidermidis RepID=C5QAD1_STAEP
NADH-Ubiquinone/plastoquinone (complex I), various chains family protein
NADH dehydrogenase subunit 5 {ECO:0000313|EMBL:ETJ21009.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_39_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13827..16394
DNA (2568bp) protein (856aa)
UPF0753 protein SEVCU028_1370 n=3 Tax=Staphylococcus epidermidis RepID=F3TTD2_STAEP
Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase chain 5 homolog
UPF0753 protein HMPREF0794_1603 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_059_011G1_scaffold_39_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16507..16875
DNA (369bp) protein (123aa)
Uncharacterized protein n=64 Tax=Staphylococcus epidermidis RepID=Q5HRV5_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53500.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_059_011G1_scaffold_39_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17387..18088
DNA (702bp) protein (234aa)
PAP2 family protein n=21 Tax=Staphylococcus epidermidis RepID=C5QAC7_STAEP
PAP2 family protein {ECO:0000313|EMBL:EFE58636.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
PAP2 superfamily protein
L2_059_011G1_scaffold_39_14

Not on your lists

18195..18923
DNA (729bp) protein (243aa)
Uncharacterized protein n=22 Tax=Staphylococcus epidermidis RepID=C5QAC6_STAEP
dienelactone hydrolase family protein
Carboxylesterase family protein {ECO:0000313|EMBL:ETJ21004.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_39_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18938..19180
DNA (243bp) protein (81aa)
Uncharacterized protein n=75 Tax=Staphylococcus epidermidis RepID=Q5HRV1_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV19191.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_059_011G1_scaffold_39_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19325..20653
DNA (1329bp) protein (443aa)
Transporter n=50 Tax=Staphylococcus epidermidis RepID=Q5HRV0_STAEQ
Sodium-dependent transporter
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_059_011G1_scaffold_39_17

Not on your lists

comp(20832..21371)
DNA (540bp) protein (180aa)
Uncharacterized protein n=25 Tax=Staphylococcus epidermidis RepID=C5QAC3_STAEP
hypothetical protein
Pentapeptide repeat protein {ECO:0000313|EMBL:ETJ21001.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_39_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21680..22504
DNA (825bp) protein (275aa)
Cystathionine beta-synthase (EC:4.2.1.22)
Pyridoxal-phosphate dependent protein {ECO:0000313|EMBL:EFE58641.1}; EC=2.5.1.47 {ECO:0000313|EMBL:EFE58641.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
O-acetylserine dependent cystathionine beta-synthase n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1DZH8_STAEP
L2_059_011G1_scaffold_39_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22580..23725
DNA (1146bp) protein (382aa)
Cystathionine gamma-lyase (EC:4.4.1.1)
Trans-sulfuration enzyme family protein n=48 Tax=Staphylococcus epidermidis RepID=Q5HRU7_STAEQ
Trans-sulfuration enzyme family protein {ECO:0000313|EMBL:AAW53516.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_059_011G1_scaffold_39_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23972..24997
DNA (1026bp) protein (342aa)
Methionine import ATP-binding protein MetN 2 {ECO:0000255|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01719};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Methionine import ATP-binding protein MetN 1 n=45 Tax=Staphylococcus epidermidis RepID=METN1_STAEQ
ABC transporter ATP-binding protein
L2_059_011G1_scaffold_39_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25000..25659
DNA (660bp) protein (220aa)
ABC transporter, permease protein n=74 Tax=Staphylococcus epidermidis RepID=Q5HRU4_STAEQ
Methionine ABC transporter permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:AAW53526.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_059_011G1_scaffold_39_22

Not on your lists

25703..26548
DNA (846bp) protein (282aa)
Lipoprotein n=12 Tax=Staphylococcus epidermidis RepID=C5QAB8_STAEP
Methionine ABC transporter substrate-binding protein
Lipoprotein {ECO:0000313|EMBL:ETJ18072.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_39_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27073..28047
DNA (975bp) protein (325aa)
N-acetylmuramoyl-L-alanine amidase sle1; EC=3.5.1.28;; Flags: Precursor;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
N-acetylmuramoyl-L-alanine amidase sle1 n=44 Tax=Staphylococcus epidermidis RepID=SLE1_STAEQ
LysM domain-containing protein
L2_059_011G1_scaffold_39_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28174..29679)
DNA (1506bp) protein (502aa)
Poly(glycerol-phosphate) alpha-glucosyltransferase (EC:2.4.1.52)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFE58647.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFE58647.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Glycosyl transferase, group 1 family protein n=35 Tax=Staphylococcus epidermidis RepID=Q5HRU1_STAEQ
L2_059_011G1_scaffold_39_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30054..30332)
DNA (279bp) protein (93aa)
Uncharacterized protein n=42 Tax=Staphylococcus epidermidis RepID=Q5HRU0_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58648.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_059_011G1_scaffold_39_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30520..30906
DNA (387bp) protein (129aa)
MutT/nudix family protein n=43 Tax=Staphylococcus epidermidis RepID=Q5HRT9_STAEQ
MutT domain containing protein
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFE58649.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_059_011G1_scaffold_39_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31419..32204)
DNA (786bp) protein (262aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HRT7_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53540.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_059_011G1_scaffold_39_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32201..33313)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HRT6_STAEQ
yibE/F-like family protein
YibE/F-like protein {ECO:0000313|EMBL:EFE58652.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_059_011G1_scaffold_39_29

Not on your lists

comp(33450..34331)
DNA (882bp) protein (294aa)
Transcriptional regulator, LysR family n=13 Tax=Staphylococcus epidermidis RepID=C5QAB1_STAEP
Transcription activator of glutamate synthase operon
Glutamate synthase operon transcriptional regulator {ECO:0000313|EMBL:ETJ18065.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_39_30

Not on your lists

34523..39019
DNA (4497bp) protein (1499aa)
Class II glutamine amidotransferase n=21 Tax=Staphylococcus RepID=C5QAB0_STAEP
glutamine amidotransferases class-II family protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ18064.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying items 1-30 of 38 in total

View Taxonomy