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L2_059_011G1_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_011G1_scaffold_48_1

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comp(1..150)
DNA (150bp) protein (50aa)
Phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Staphylococcus epidermidis NIHLM040 RepID=J0P7C0_STAEP
Phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:ETJ20276.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_48_2

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comp(150..1181)
DNA (1032bp) protein (344aa)
Phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=45 Tax=Staphylococcus epidermidis RepID=PUR5_STAEQ
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000313|EMBL:ETJ20277.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_48_3

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comp(1174..2658)
DNA (1485bp) protein (495aa)
Amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=40 Tax=Staphylococcus epidermidis RepID=C5Q880_STAEP
Amidophosphoribosyltransferase {ECO:0000313|EMBL:ETJ20278.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_48_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2637..4826)
DNA (2190bp) protein (730aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000255|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000255|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000255|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000255|HAMAP-Rule:MF_00420}; Short=FGAR amidotransferase II {ECO:0000255|HAMAP-Rule:MF_00420};; Short=FGAR-AT II {ECO:0000255|HAMAP-Rule:MF_00420};; Glutamine amidotransferase PurL {ECO:0000255|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000255|HAMAP-Rule:MF_00420}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=11 Tax=Staphylococcus epidermidis RepID=PURL_STAES
L2_059_011G1_scaffold_48_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4819..5490)
DNA (672bp) protein (224aa)
Phosphoribosylformylglycinamidine synthase,glutamine amidotransferase subunit (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000255|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000255|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000255|HAMAP-Rule:MF_00421};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000255|HAMAP-Rule:MF_00421}; Short=FGAR amidotransferase I {ECO:0000255|HAMAP-Rule:MF_00421};; Short=FGAR-AT I {ECO:0000255|HAMAP-Rule:MF_00421};; Glutaminase PurQ {ECO:0000255|HAMAP-Rule:MF_00421}; EC=3.5.1.2 {ECO:0000255|HAMAP-Rule:MF_00421};; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000255|HAMAP-Rule:MF_00421}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Phosphoribosylformylglycinamidine synthase 1 n=50 Tax=Staphylococcus epidermidis RepID=PURQ_STAEQ
L2_059_011G1_scaffold_48_6

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comp(5492..5752)
DNA (261bp) protein (87aa)
Phosphoribosylformylglycinamidine synthase, PurS subunit (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase, PurS protein n=67 Tax=Staphylococcus epidermidis RepID=Q5HQA3_STAEQ
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000313|EMBL:ETJ20281.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_48_7

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comp(5752..6456)
DNA (705bp) protein (235aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=49 Tax=Staphylococcus epidermidis RepID=PUR7_STAEQ
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000313|EMBL:ETJ20282.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_48_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6457..7584)
DNA (1128bp) protein (376aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000255|HAMAP-Rule:MF_01928}; Short=N5-CAIR synthase {ECO:0000255|HAMAP-Rule:MF_01928};; EC=6.3.4.18 {ECO:0000255|HAMAP-Rule:MF_01928};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000255|HAMAP-Rule:MF_01928}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
N5-carboxyaminoimidazole ribonucleotide synthase n=47 Tax=Staphylococcus epidermidis RepID=PURK_STAES
phosphoribosylaminoimidazole carboxylase ATPase subunit
L2_059_011G1_scaffold_48_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7571..8053)
DNA (483bp) protein (161aa)
Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=48 Tax=Staphylococcus epidermidis RepID=Q8CPP3_STAES
L2_059_011G1_scaffold_48_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8258..9118
DNA (861bp) protein (287aa)
folD; bifunctional protein FolD protein (EC:3.5.4.9)
Bifunctional protein FolD n=4 Tax=Staphylococcus epidermidis RepID=E6JLD0_STAEP
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_059_011G1_scaffold_48_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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9493..9810
DNA (318bp) protein (106aa)
Chitinase-related protein n=76 Tax=Staphylococcus epidermidis RepID=Q5HQA8_STAEQ
Chitinase B
Chitinase-related protein {ECO:0000313|EMBL:AAW53985.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_059_011G1_scaffold_48_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10349..11473
DNA (1125bp) protein (375aa)
quinol oxidase polypeptide II QoxA (EC:1.9.3.-)
Cytochrome aa3 quinol oxidase, subunit II {ECO:0000313|EMBL:EES36484.1}; EC=1.10.3.- {ECO:0000313|EMBL:EES36484.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Probable quinol oxidase subunit 2 n=77 Tax=Staphylococcus epidermidis RepID=QOX2_STAEQ
L2_059_011G1_scaffold_48_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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11473..13461
DNA (1989bp) protein (663aa)
Probable quinol oxidase subunit 1; EC=1.10.3.-;; Quinol oxidase polypeptide I; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
quinol oxidase polypeptide I QoxB (EC:1.9.3.-)
Probable quinol oxidase subunit 1 n=57 Tax=Staphylococcus epidermidis RepID=QOX1_STAEQ
L2_059_011G1_scaffold_48_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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13451..14056
DNA (606bp) protein (202aa)
quinol oxidase polypeptide III QoxC (EC:1.9.3.-)
Cytochrome aa3 quinol oxidase, subunit III {ECO:0000313|EMBL:EES36482.1}; EC=1.10.3.- {ECO:0000313|EMBL:EES36482.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Probable quinol oxidase subunit 3 n=79 Tax=Staphylococcus epidermidis RepID=QOX3_STAEQ
L2_059_011G1_scaffold_48_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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14053..14343
DNA (291bp) protein (97aa)
quinol oxidase polypeptide IV QoxD (EC:1.9.3.-)
Probable quinol oxidase subunit 4; EC=1.10.3.-;; Quinol oxidase polypeptide IV; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Probable quinol oxidase subunit 4 n=57 Tax=Staphylococcus epidermidis RepID=QOX4_STAEQ
L2_059_011G1_scaffold_48_16

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14509..15438
DNA (930bp) protein (310aa)
Inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1)
Inosine-uridine preferring nucleoside hydrolase family protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HQB3_STAEQ
Putative ribosylpyrimidine nucleosidase {ECO:0000313|EMBL:ETJ20291.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_48_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(15595..16797)
DNA (1203bp) protein (401aa)
Fmt protein n=29 Tax=Staphylococcus epidermidis RepID=Q5HQB4_STAEQ
FmtA protein involved in methicillin resistance # affects cell wall cross-linking and amidation
Fmt protein {ECO:0000313|EMBL:AAW53973.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_059_011G1_scaffold_48_18

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17604..18842
DNA (1239bp) protein (413aa)
Transcriptional regulator, putative n=45 Tax=Staphylococcus epidermidis RepID=Q5HQB5_STAEQ
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F2 (as in PMID19099556)
LytR family transcriptional regulator {ECO:0000313|EMBL:ETJ20293.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_48_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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18890..19360
DNA (471bp) protein (157aa)
Uncharacterized protein n=53 Tax=Staphylococcus epidermidis RepID=Q5HQB6_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53971.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_059_011G1_scaffold_48_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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19708..19839
DNA (132bp) protein (44aa)
IS1272-like transposase, degenerate n=6 Tax=Staphylococcus epidermidis RepID=Q5HQB7_STAEQ
truncated IS1272 transposase
IS1272, transposase {ECO:0000313|EMBL:EFE59305.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_059_011G1_scaffold_48_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19883..20356
DNA (474bp) protein (158aa)
Acetyltransferase, GNAT family n=1 Tax=Staphylococcus epidermidis NIHLM067 RepID=J0YEU9_STAEP
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EES36506.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
acetyltransferase domain protein
L2_059_011G1_scaffold_48_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20597..24604
DNA (4008bp) protein (1336aa)
atl; bifunctional autolysin (EC:3.2.1.96)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EFE59307.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EFE59307.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Bifunctional autolysin n=42 Tax=Staphylococcus RepID=ATL_STAEQ
L2_059_011G1_scaffold_48_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(24844..25263)
DNA (420bp) protein (140aa)
Transcriptional regulator, MarR family n=69 Tax=Staphylococcus epidermidis RepID=Q5HQC0_STAEQ
Putative ATL autolysin transcription regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EES36504.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_059_011G1_scaffold_48_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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25417..26424
DNA (1008bp) protein (336aa)
Membrane protein, putative n=49 Tax=Staphylococcus epidermidis RepID=Q5HQC1_STAEQ
acyltransferase family protein
Membrane protein, putative {ECO:0000313|EMBL:AAW53959.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_059_011G1_scaffold_48_25

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26567..27751
DNA (1185bp) protein (395aa)
N-acetyl-L,L-diaminopimelate aminotransferase (EC:2.6.1.-)
Aminotransferase A n=1 Tax=Staphylococcus epidermidis NIHLM001 RepID=J0I1C7_STAEP
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:ETJ17901.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_48_26

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comp(28096..28914)
DNA (819bp) protein (273aa)
menB; naphthoate synthase (EC:4.1.3.36)
1,4-Dihydroxy-2-naphthoyl-CoA synthase n=67 Tax=Staphylococcus epidermidis RepID=MENB_STAEQ
1,4-Dihydroxy-2-naphthoyl-CoA synthase {ECO:0000313|EMBL:ETJ17900.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_48_27

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comp(28907..29710)
DNA (804bp) protein (268aa)
menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC:4.2.99.20)
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase n=1 Tax=Staphylococcus epidermidis NIHLM040 RepID=J0FVC1_STAEP
Putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase {ECO:0000313|EMBL:ETJ17899.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_48_28

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comp(29697..31370)
DNA (1674bp) protein (558aa)
menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC:2.2.1.9)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Staphylococcus epidermidis BVS058A4 RepID=K8PR61_STAEP
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000313|EMBL:ETJ17898.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_011G1_scaffold_48_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(31357..32718)
DNA (1362bp) protein (454aa)
Menaquinone-specific isochorismate synthase (EC:5.4.4.2)
Isochorismate synthase {ECO:0000313|EMBL:EFE59314.1}; EC=5.4.4.2 {ECO:0000313|EMBL:EFE59314.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Isochorismate synthase family protein n=43 Tax=Staphylococcus epidermidis RepID=Q5HQC6_STAEQ
L2_059_011G1_scaffold_48_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32897..33835
DNA (939bp) protein (313aa)
menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC:2.5.1.74)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=48 Tax=Staphylococcus epidermidis RepID=Q5HQC8_STAEQ
Displaying items 1-30 of 41 in total

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