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L2_059_011G1_scaffold_129

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_011G1_scaffold_129_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..1703)
DNA (1701bp) protein (567aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:AAW54585.1}; EC=3.1.-.- {ECO:0000313|EMBL:AAW54585.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Staphylococcus epidermidis VCU057 RepID=H3UJE2_STAEP
recJ; single-stranded-DNA-specific exonuclease RecJ
L2_059_011G1_scaffold_129_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2568..4739)
DNA (2172bp) protein (724aa)
Export membrane protein SecD n=3 Tax=Staphylococcus epidermidis RepID=J0EJR6_STAEP
Protein-export membrane protein SecDF {ECO:0000313|EMBL:AAW54586.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
secD; export membrane protein SecD
L2_059_011G1_scaffold_129_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5089..5349)
DNA (261bp) protein (87aa)
Preprotein translocase, YajC subunit n=70 Tax=Staphylococcus epidermidis RepID=Q5HNR3_STAEQ
Preprotein translocase subunit YajC (TC 3.A.5.1.1)
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EFE59897.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_059_011G1_scaffold_129_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5365..6504)
DNA (1140bp) protein (380aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00168}; EC=2.4.2.29 {ECO:0000255|HAMAP-Rule:MF_00168};; Guanine insertion enzyme {ECO:0000255|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000255|HAMAP-Rule:MF_00168}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Queuine tRNA-ribosyltransferase n=7 Tax=Staphylococcus epidermidis RepID=H0DS24_STAEP
L2_059_011G1_scaffold_129_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6525..7589)
DNA (1065bp) protein (355aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Staphylococcus epidermidis RepID=D4FIH6_STAEP
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase
L2_059_011G1_scaffold_129_6
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7552..8556)
DNA (1005bp) protein (335aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Holliday junction ATP-dependent DNA helicase RuvB n=46 Tax=Staphylococcus epidermidis RepID=RUVB_STAEQ
L2_059_011G1_scaffold_129_7
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8570..9172)
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Holliday junction ATP-dependent DNA helicase RuvA n=54 Tax=Staphylococcus epidermidis RepID=RUVA_STAEQ
Holliday junction DNA helicase RuvA
L2_059_011G1_scaffold_129_8
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9185..9649)
DNA (465bp) protein (155aa)
UPF0735 ACT domain-containing protein HMPREF0789_1329 n=3 Tax=Staphylococcus epidermidis RepID=C5Q9Q5_STAEP
hypothetical protein
UPF0735 ACT domain-containing protein Q614_SASC00199G0002 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_059_011G1_scaffold_129_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9652..10944)
DNA (1293bp) protein (431aa)
GTPase Obg n=42 Tax=Staphylococcus epidermidis RepID=OBG_STAES
obgE; GTPase ObgE
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_059_011G1_scaffold_129_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(11090..11374)
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=86 Tax=Staphylococcus RepID=RL27_STAEQ
LSU ribosomal protein L27p
50S ribosomal protein L27 {ECO:0000255|HAMAP-Rule:MF_00539}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L2_059_011G1_scaffold_129_11
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11386..11706)
DNA (321bp) protein (107aa)
Uncharacterized protein n=78 Tax=Staphylococcus epidermidis RepID=Q5HNQ5_STAEQ
Potential ribosomal protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ14777.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_059_011G1_scaffold_129_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(11711..12019)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=81 Tax=Staphylococcus epidermidis RepID=RL21_STAEQ
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L2_059_011G1_scaffold_129_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12141..12662)
DNA (522bp) protein (174aa)
Rod shape-determining protein MreD, putative n=50 Tax=Staphylococcus epidermidis RepID=Q5HNQ3_STAEQ
mreD; rod shape-determining protein MreD
Rod shape-determining protein MreD, putative {ECO:0000313|EMBL:AAW54605.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_059_011G1_scaffold_129_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12662..13252)
DNA (591bp) protein (197aa)
Cell shape-determining protein MreC n=2 Tax=Staphylococcus epidermidis RepID=J0PKU8_STAEP
Rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying 14 items

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