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L2_059_037G1_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_037G1_scaffold_26_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..279
DNA (279bp) protein (93aa)
YD repeat (Two copies) n=1 Tax=Citrobacter sp. 30_2 RepID=C1M4X0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX63051.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_059_037G1_scaffold_26_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

380..1183
DNA (804bp) protein (268aa)
2,5-diketo-D-gluconic acid reductase {ECO:0000313|EMBL:KJC04496.1}; EC=1.1.1.274 {ECO:0000313|EMBL:KJC04496.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
2,5-diketo-D-gluconate reductase B n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QYK6_CITFR
dkgB; 2,5-didehydrogluconate reductase
L2_059_037G1_scaffold_26_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1205..2119)
DNA (915bp) protein (305aa)
LysR family transcriptional regulator n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QTZ3_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL80685.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
LysR substrate binding domain-containing protein
L2_059_037G1_scaffold_26_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2224..3399
DNA (1176bp) protein (392aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=R8V1C1_9ENTR
Drug efflux protein {ECO:0000313|EMBL:ETX72267.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
MFS sugar transporter
L2_059_037G1_scaffold_26_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3552..4331
DNA (780bp) protein (260aa)
UPF0294 protein D186_11713 n=6 Tax=Citrobacter RepID=K8QQF3_CITFR
UPF0294 protein P834_05306 {ECO:0000256|HAMAP-Rule:MF_01119}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_037G1_scaffold_26_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4408..5178
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QSC6_CITFR
SAM-dependent methyltransferase {ECO:0000313|EMBL:KJC05720.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
SAM-dependent methyltransferase
L2_059_037G1_scaffold_26_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5228..6448)
DNA (1221bp) protein (407aa)
Membrane-bound lytic murein transglycosylase D n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QYK2_CITFR
Lytic murein transglycosylase {ECO:0000313|EMBL:KJC05719.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
mltD; lytic murein transglycosylase
L2_059_037G1_scaffold_26_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6658..7413)
DNA (756bp) protein (252aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase n=6 Tax=Citrobacter RepID=J1FW69_9ENTR
L2_059_037G1_scaffold_26_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7447..8169
DNA (723bp) protein (241aa)
Sam-dependent methyltransferase n=6 Tax=Citrobacter RepID=J0VJN6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC05717.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_037G1_scaffold_26_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8166..8633)
DNA (468bp) protein (156aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Ribonuclease H n=4 Tax=Citrobacter RepID=C1M6R6_9ENTR
ribonuclease H
L2_059_037G1_scaffold_26_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8689..9426
DNA (738bp) protein (246aa)
DNA polymerase subunit III epsilon n=5 Tax=Citrobacter RepID=J1FW08_9ENTR
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KJC05715.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNA polymerase III subunit epsilon
L2_059_037G1_scaffold_26_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9795..10313)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QYJ8_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC05714.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_037G1_scaffold_26_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10315..11103)
DNA (789bp) protein (263aa)
Putative transcriptional regulator n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QTY3_CITFR
Transcriptional regulator {ECO:0000313|EMBL:KJC05713.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_037G1_scaffold_26_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11749..12297
DNA (549bp) protein (183aa)
Major fimbrial subunit n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BDV5_9ENTR
Fimbrial protein {ECO:0000313|EMBL:KJC04507.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
major fimbrial subunit PmfA
L2_059_037G1_scaffold_26_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12367..12915
DNA (549bp) protein (183aa)
Putative fimbrial subunit n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQE7_CITFR
Fimbrial protein {ECO:0000313|EMBL:KJC04508.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
putative fimbrial subunit
L2_059_037G1_scaffold_26_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12957..15428
DNA (2472bp) protein (824aa)
Putative fimbrial usher protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QSB8_CITFR
Fimbrial assembly protein {ECO:0000313|EMBL:KJC04509.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fimbrial assembly protein
L2_059_037G1_scaffold_26_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15443..16231
DNA (789bp) protein (263aa)
Putative fimbrial chaperone protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QYJ3_CITFR
Chaperone PmfD {ECO:0000313|EMBL:ETX72280.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
molecular chaperone
L2_059_037G1_scaffold_26_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16244..16849
DNA (606bp) protein (202aa)
Putative fimbrial subunit n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QTY0_CITFR
Fimbrial protein {ECO:0000313|EMBL:KJC05708.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fimbrial protein
L2_059_037G1_scaffold_26_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16846..17910
DNA (1065bp) protein (355aa)
Putative minor fimbrial subunit PmfE n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R2A5_CITFR
Fimbrial protein {ECO:0000313|EMBL:KJC05707.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fimbrial protein
L2_059_037G1_scaffold_26_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17920..18462
DNA (543bp) protein (181aa)
Putative fimbrial subunit n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQE4_CITFR
Fimbrial protein {ECO:0000313|EMBL:KJC05706.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
FIG00510011: hypothetical protein
L2_059_037G1_scaffold_26_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18467..20131
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QSB6_CITFR
Tat pathway signal sequence {ECO:0000313|EMBL:KJC05705.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
FIG00510147: hypothetical protein
L2_059_037G1_scaffold_26_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20133..20852
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QYI9_CITFR
Diguanylate phosphodiesterase {ECO:0000313|EMBL:KJC04515.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
diguanylate phosphodiesterase
L2_059_037G1_scaffold_26_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20868..21278)
DNA (411bp) protein (137aa)
Secreted protein n=4 Tax=Citrobacter RepID=J0LS80_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72286.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
VirG
L2_059_037G1_scaffold_26_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21458..22225)
DNA (768bp) protein (256aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=4 Tax=Citrobacter RepID=J1FW80_9ENTR
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:ETX72287.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
carbon-nitrogen hydrolase
L2_059_037G1_scaffold_26_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22336..24780)
DNA (2445bp) protein (815aa)
Acyl-CoA dehydrogenase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQD9_CITFR
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KJC04518.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fadE; acyl-CoA dehydrogenase
L2_059_037G1_scaffold_26_26
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25020..25601
DNA (582bp) protein (194aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Phosphoheptose isomerase n=9 Tax=Enterobacteriaceae RepID=C1M6T2_9ENTR
gmhA; phosphoheptose isomerase
L2_059_037G1_scaffold_26_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25713..26480
DNA (768bp) protein (256aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1M6T3_9ENTR
Glutamine amidotransferase {ECO:0000313|EMBL:ETX72290.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
glutamine amidotransferase
L2_059_037G1_scaffold_26_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26451..27191)
DNA (741bp) protein (247aa)
Lipoprotein n=2 Tax=Citrobacter freundii RepID=K8QTX1_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX65309.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
transpeptidase
L2_059_037G1_scaffold_26_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27541..28302
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R297_CITFR
Endopeptidase {ECO:0000313|EMBL:KJC04522.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
endopeptidase
L2_059_037G1_scaffold_26_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28340..30433)
DNA (2094bp) protein (698aa)
Flagellar export/assembly protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQD5_CITFR
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:KJC04523.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
flagellar biosynthesis protein FlhA
Displaying items 1-30 of 111 in total

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