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L2_059_037G1_scaffold_38

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Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_037G1_scaffold_38_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..791)
DNA (789bp) protein (263aa)
Protein nrfD n=5 Tax=Citrobacter RepID=J0LZ26_9ENTR
Nitrite reductase {ECO:0000313|EMBL:KJC01089.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
nitrite reductase
L2_059_037G1_scaffold_38_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(788..1459)
DNA (672bp) protein (224aa)
Cytochrome c nitrite reductase, Fe-S protein {ECO:0000313|EMBL:KEL78258.1}; EC=1.7.2.2 {ECO:0000313|EMBL:KEL78258.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Protein nrfC n=7 Tax=Citrobacter RepID=G9SAZ2_CITFR
nitrite reductase
L2_059_037G1_scaffold_38_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1456..2022)
DNA (567bp) protein (189aa)
Cytochrome c-type protein NrfB n=6 Tax=Citrobacter RepID=J0LSU9_9ENTR
Cytochrome c-type protein NrfB {ECO:0000313|EMBL:CDL37809.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
cytochrome C nitrite reductase
L2_059_037G1_scaffold_38_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2067..3503)
DNA (1437bp) protein (479aa)
Cytochrome c-552 {ECO:0000256|HAMAP-Rule:MF_01182, ECO:0000256|SAAS:SAAS00233541}; EC=1.7.2.2 {ECO:0000256|HAMAP-Rule:MF_01182, ECO:0000256|SAAS:SAAS00233490};; Ammonia-forming cytochrome c nitrite reductase {ECO:0000256|HAMAP-Rule:MF_01182}; Flags: Precursor;; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
nrfA; cytochrome C nitrite reductase (EC:1.7.2.2)
Cytochrome c-552 n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BJZ0_CITFR
L2_059_037G1_scaffold_38_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3937..5895
DNA (1959bp) protein (653aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
acetyl-CoA synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase n=2 Tax=Citrobacter RepID=C1MFJ8_9ENTR
L2_059_037G1_scaffold_38_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6131..6445
DNA (315bp) protein (105aa)
Inner membrane protein yjcH n=7 Tax=Enterobacteriaceae RepID=C1MFJ7_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC06478.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_059_037G1_scaffold_38_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6442..8091
DNA (1650bp) protein (550aa)
Cation/acetate symporter ActP n=6 Tax=Citrobacter RepID=J1FWP3_9ENTR
Cation/acetate symporter ActP {ECO:0000256|HAMAP-Rule:MF_01426, ECO:0000256|SAAS:SAAS00025334}; Acetate permease {ECO:0000256|HAMAP-Rule:MF_01426}; Acetate transporter ActP {ECO:0000256|HAMAP-Rule:MF_01426}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
actP; acetate permease
L2_059_037G1_scaffold_38_8
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8137..8826)
DNA (690bp) protein (230aa)
TIGR00659 family protein n=8 Tax=Citrobacter RepID=C1MFJ5_9ENTR
Putative TIGR00659 family protein {ECO:0000313|EMBL:EFE05485.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
LrgB
L2_059_037G1_scaffold_38_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8819..9229)
DNA (411bp) protein (137aa)
Uncharacterized protein n=3 Tax=Citrobacter freundii RepID=K8QMH4_CITFR
LrgA {ECO:0000313|EMBL:KJC01097.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
LrgA
L2_059_037G1_scaffold_38_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9331..10221
DNA (891bp) protein (297aa)
LysR family regulatory protein n=2 Tax=Citrobacter RepID=M3CJ53_CITFR
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEL78266.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
transcriptional regulator
L2_059_037G1_scaffold_38_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10307..11953)
DNA (1647bp) protein (549aa)
Na+/H+ antiporter n=2 Tax=Citrobacter RepID=C1MFJ2_9ENTR
Na+/H+ antiporter {ECO:0000313|EMBL:KDF10780.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
sodium:proton antiporter
L2_059_037G1_scaffold_38_12
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12111..13460)
DNA (1350bp) protein (450aa)
Permease n=1 Tax=Citrobacter sp. KTE32 RepID=R8VTA8_9ENTR
Permase {ECO:0000313|EMBL:KKC61328.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
permase
L2_059_037G1_scaffold_38_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14185..14643)
DNA (459bp) protein (153aa)
Redox-sensitive transcriptional activator SoxR n=6 Tax=Citrobacter RepID=J0LSV9_9ENTR
Redox-sensitive transcriptional activator soxR {ECO:0000313|EMBL:ETX71743.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
L2_059_037G1_scaffold_38_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14730..15053
DNA (324bp) protein (108aa)
Regulatory protein soxS n=8 Tax=Citrobacter RepID=C1MFI9_9ENTR
Regulatory protein soxS {ECO:0000313|EMBL:ETX71742.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
L2_059_037G1_scaffold_38_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15056..16642)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QTH7_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL78271.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
signal peptide protein
L2_059_037G1_scaffold_38_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17196..17477
DNA (282bp) protein (94aa)
Membrane protein n=4 Tax=Citrobacter RepID=J0LZ38_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC06474.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_059_037G1_scaffold_38_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17561..19870)
DNA (2310bp) protein (770aa)
Putative autotransporter protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QX34_CITFR
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:KEL78273.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
outer membrane autotransporter barrel domain protein
L2_059_037G1_scaffold_38_18
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20352..20876)
DNA (525bp) protein (175aa)
Single-stranded DNA-binding protein n=6 Tax=Enterobacteriaceae RepID=C1MFI6_9ENTR
single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
L2_059_037G1_scaffold_38_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21128..23950
DNA (2823bp) protein (941aa)
UvrABC system protein A n=5 Tax=Citrobacter RepID=J1FWW9_9ENTR
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; UvrABC system protein A; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
excinuclease ABC subunit A
L2_059_037G1_scaffold_38_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24074..24430)
DNA (357bp) protein (119aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=J0VKC4_9ENTR
Protein yjbR {ECO:0000313|EMBL:CDL36706.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L2_059_037G1_scaffold_38_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24558..25271)
DNA (714bp) protein (238aa)
Class B acid phosphatase {ECO:0000256|PIRNR:PIRNR017818}; EC=3.1.3.2 {ECO:0000256|PIRNR:PIRNR017818};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
aphA; acid phosphatase (EC:3.1.3.2)
Class B acid phosphatase n=3 Tax=Citrobacter RepID=J0LZ42_9ENTR
L2_059_037G1_scaffold_38_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25520..26713)
DNA (1194bp) protein (398aa)
aromatic amino acid aminotransferase (EC:2.6.1.57)
Aromatic-amino-acid aminotransferase n=2 Tax=Citrobacter RepID=J1FWQ2_9ENTR
Aromatic-amino-acid aminotransferase {ECO:0000313|EMBL:ETX71735.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_059_037G1_scaffold_38_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26841..27920)
DNA (1080bp) protein (360aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase n=4 Tax=Citrobacter RepID=J0LSW5_9ENTR
L2_059_037G1_scaffold_38_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27937..29352)
DNA (1416bp) protein (472aa)
Replicative DNA helicase n=7 Tax=Citrobacter RepID=C1MFI0_9ENTR
DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:KDF10768.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
L2_059_037G1_scaffold_38_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29417..30400
DNA (984bp) protein (328aa)
Quinone oxidoreductase, NADPH-dependent n=3 Tax=Citrobacter RepID=K8QT08_CITFR
Quinone oxidoreductase {ECO:0000313|EMBL:KJC06317.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
quinone oxidoreductase
L2_059_037G1_scaffold_38_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30702..30944)
DNA (243bp) protein (81aa)
Phage shock protein G n=8 Tax=Citrobacter RepID=C1MFH8_9ENTR
Phage shock protein {ECO:0000313|EMBL:KJC01113.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
pspG; phage shock protein
L2_059_037G1_scaffold_38_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31078..32076)
DNA (999bp) protein (333aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
tRNA-dihydrouridine synthase n=2 Tax=Citrobacter RepID=K8QJF8_CITFR
tRNA-dihydrouridine synthase A
L2_059_037G1_scaffold_38_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32184..32672)
DNA (489bp) protein (163aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1MFH6_9ENTR
Cupin domain protein {ECO:0000313|EMBL:KEL78284.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
cupin
L2_059_037G1_scaffold_38_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32788..33306
DNA (519bp) protein (173aa)
Zinc uptake regulation protein n=10 Tax=Citrobacter RepID=C1MFH5_9ENTR
Ferric uptake regulator family protein {ECO:0000313|EMBL:KEL78285.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
zinc uptake transcriptional repressor
L2_059_037G1_scaffold_38_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33355..33567)
DNA (213bp) protein (71aa)
UPF0337 protein yjbJ n=8 Tax=Citrobacter RepID=C1MFH4_9ENTR
UPF0337 protein yjbJ {ECO:0000313|EMBL:CDL36692.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
Displaying items 1-30 of 81 in total

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