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L2_059_037G1_scaffold_39

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Displaying items 1-30 of 84 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_037G1_scaffold_39_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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55..858
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9S967_CITFR
DeoR family transcriptional regulator {ECO:0000313|EMBL:ETX67044.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
DeoR faimly transcriptional regulator
L2_059_037G1_scaffold_39_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

964..1563
DNA (600bp) protein (200aa)
Phosphatase yihX n=1 Tax=Citrobacter sp. KTE30 RepID=R8UMN3_9ENTR
Alpha-D-glucose-1-phosphatase {ECO:0000313|EMBL:KJC04063.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
alpha-D-glucose-1-phosphatase
L2_059_037G1_scaffold_39_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1650..2429
DNA (780bp) protein (260aa)
UPF0761 membrane protein H262_22433 n=5 Tax=Citrobacter RepID=M3DFD6_CITFR
UPF0761 membrane protein P834_09244 {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_037G1_scaffold_39_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2426..2863
DNA (438bp) protein (146aa)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QYJ1_CITFR
D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000313|EMBL:KJC07388.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
D-tyrosyl-tRNA(Tyr) deacylase
L2_059_037G1_scaffold_39_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2908..3849
DNA (942bp) protein (314aa)
Acetyltransferase n=1 Tax=Citrobacter sp. KTE151 RepID=R8WJA2_9ENTR
Thioesterase {ECO:0000313|EMBL:ETX61073.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L2_059_037G1_scaffold_39_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4000..4908)
DNA (909bp) protein (303aa)
Lipase n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1FKJ0_CITFR
Lipase, GDXG family {ECO:0000313|EMBL:CDL38420.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
lipase
L2_059_037G1_scaffold_39_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5108..5356
DNA (249bp) protein (83aa)
CopG family transcriptional regulator n=3 Tax=Citrobacter RepID=K8QNT6_CITFR
Uncharacterized protein {ECO:0000313|EMBL:CDL38421.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L2_059_037G1_scaffold_39_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5356..5730
DNA (375bp) protein (125aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Ribonuclease VapC n=5 Tax=Citrobacter RepID=J0M1Z2_9ENTR
hypothetical protein
L2_059_037G1_scaffold_39_9
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5767..6696)
DNA (930bp) protein (310aa)
Protein FdhE homolog n=8 Tax=Citrobacter RepID=C1MFT9_9ENTR
Protein FdhE homolog {ECO:0000256|HAMAP-Rule:MF_00611}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
formate dehydrogenase
L2_059_037G1_scaffold_39_10
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6693..7328)
DNA (636bp) protein (212aa)
Formate dehydrogenase, cytochrome b556(Fdo) subunit n=10 Tax=Citrobacter RepID=C1MFU0_9ENTR
Formate dehydrogenase, cytochrome b556(Fdo) subunit {ECO:0000313|EMBL:EOQ44801.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
formate dehydrogenase
L2_059_037G1_scaffold_39_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7325..8227)
DNA (903bp) protein (301aa)
Formate dehydrogenase, beta subunit n=7 Tax=Citrobacter RepID=D4BEC3_9ENTR
formate dehydrogenase
Formate dehydrogenase-O iron-sulfur subunit {ECO:0000313|EMBL:KDF04909.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
L2_059_037G1_scaffold_39_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8240..10654)
DNA (2415bp) protein (805aa)
Formate dehydrogenase O alpha subunit @ selenocysteine-containing {ECO:0000313|EMBL:CDL38425.1}; EC=1.2.1.2 {ECO:0000313|EMBL:CDL38425.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Formate dehydrogenase-O major subunit n=4 Tax=Citrobacter RepID=J0VNA3_9ENTR
formate dehydrogenase
L2_059_037G1_scaffold_39_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10703..11311)
DNA (609bp) protein (203aa)
Formate dehydrogenase-O small subunit n=12 Tax=Enterobacteriaceae RepID=J0M1Z7_9ENTR
Formate dehydrogenase-O major subunit {ECO:0000313|EMBL:ETX67056.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
sulfate ABC transporter substrate-binding protein
L2_059_037G1_scaffold_39_14
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11483..12319
DNA (837bp) protein (279aa)
Protein FdhD homolog n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1HI93_CITFR
Protein FdhD {ECO:0000256|HAMAP-Rule:MF_00187}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
formate dehydrogenase
L2_059_037G1_scaffold_39_15
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12448..12660
DNA (213bp) protein (71aa)
Uncharacterized protein n=10 Tax=Enterobacteriaceae RepID=C1MFU7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CEJ66553.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
hypothetical protein
L2_059_037G1_scaffold_39_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12703..13026)
DNA (324bp) protein (108aa)
Branched-chain amino acid transport n=2 Tax=Citrobacter RepID=K8QUV6_CITFR
Branched-chain amino acid transport {ECO:0000313|EMBL:KJC04050.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
branched-chain amino acid transport
L2_059_037G1_scaffold_39_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13026..13685)
DNA (660bp) protein (220aa)
Azaleucine resistance protein n=5 Tax=Citrobacter RepID=J0VNA8_9ENTR
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KJC07406.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
branched-chain amino acid ABC transporter permease
L2_059_037G1_scaffold_39_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13787..14335
DNA (549bp) protein (183aa)
Helix-turn-helix family protein n=7 Tax=Enterobacteriaceae RepID=I6HF19_SHIFL
Helix-turn-helix family protein {ECO:0000313|EMBL:KEL77746.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
DNA-binding protein
L2_059_037G1_scaffold_39_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14393..14707)
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|HAMAP-Rule:MF_01663, ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|HAMAP-Rule:MF_01663, ECO:0000256|SAAS:SAAS00169483};; Rhamnose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01663}; Type-3 mutarotase {ECO:0000256|HAMAP-Rule:MF_01663}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L-rhamnose mutarotase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CS43_CITFR
L-rhamnose mutarotase
L2_059_037G1_scaffold_39_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14704..15852)
DNA (1149bp) protein (383aa)
Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization {ECO:0000313|EMBL:CDL38433.1}; EC=1.2.1.22 {ECO:0000313|EMBL:CDL38433.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Alcohol dehydrogenase n=3 Tax=Citrobacter RepID=J0LVP9_9ENTR
alcohol dehydrogenase
L2_059_037G1_scaffold_39_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15864..16688)
DNA (825bp) protein (275aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
rhamnulose-1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=3 Tax=Citrobacter RepID=J1FZV4_9ENTR
L2_059_037G1_scaffold_39_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16832..18091)
DNA (1260bp) protein (420aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
sugar isomerase (EC:5.3.1.14)
L-rhamnose isomerase n=4 Tax=Citrobacter RepID=J0VNB3_9ENTR
L2_059_037G1_scaffold_39_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18088..19557)
DNA (1470bp) protein (490aa)
Rhamnulokinase {ECO:0000256|HAMAP-Rule:MF_01535}; Short=RhaB {ECO:0000256|HAMAP-Rule:MF_01535};; EC=2.7.1.5 {ECO:0000256|HAMAP-Rule:MF_01535};; ATP:L-rhamnulose phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01535}; L-rhamnulose 1-kinase {ECO:0000256|HAMAP-Rule:MF_01535}; Rhamnulose kinase {ECO:0000256|HAMAP-Rule:MF_01535}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Rhamnulokinase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UIZ1_9ENTR
rhamnulokinase
L2_059_037G1_scaffold_39_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19861..20709
DNA (849bp) protein (283aa)
HTH-type transcriptional activator RhaS n=3 Tax=Citrobacter RepID=K8QYL2_CITFR
HTH-type transcriptional activator RhaS {ECO:0000256|HAMAP-Rule:MF_01534, ECO:0000256|SAAS:SAAS00011458}; L-rhamnose operon regulatory protein RhaS {ECO:0000256|HAMAP-Rule:MF_01534}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
AraC family transcriptional regulator
L2_059_037G1_scaffold_39_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20841..21689
DNA (849bp) protein (283aa)
HTH-type transcriptional activator RhaR n=2 Tax=Citrobacter RepID=M3B9B2_CITFR
HTH-type transcriptional activator RhaR {ECO:0000256|HAMAP-Rule:MF_01533}; L-rhamnose operon transcriptional activator RhaR {ECO:0000256|HAMAP-Rule:MF_01533}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
transcriptional activator RhaR
L2_059_037G1_scaffold_39_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21686..22720)
DNA (1035bp) protein (345aa)
L-rhamnose-proton symporter n=2 Tax=Citrobacter freundii RepID=K8QUW3_CITFR
L-rhamnose-proton symporter {ECO:0000256|HAMAP-Rule:MF_01532, ECO:0000256|SAAS:SAAS00088063}; L-rhamnose-H(+) transport protein {ECO:0000256|HAMAP-Rule:MF_01532}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
rhamnose:proton symporter
L2_059_037G1_scaffold_39_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23010..23630
DNA (621bp) protein (207aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Superoxide dismutase n=3 Tax=Citrobacter RepID=K8QNV8_CITFR
superoxide dismutase
L2_059_037G1_scaffold_39_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23864..24847
DNA (984bp) protein (328aa)
2-keto-3-deoxygluconate permease n=1 Tax=Citrobacter sp. 30_2 RepID=C1MFW0_9ENTR
2-keto-3-deoxygluconate permease {ECO:0000256|HAMAP-Rule:MF_00070}; Short=KDG permease {ECO:0000256|HAMAP-Rule:MF_00070};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
2-keto-3-deoxygluconate permease
L2_059_037G1_scaffold_39_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24889..25785)
DNA (897bp) protein (299aa)
Lyase n=2 Tax=Citrobacter RepID=M3CS34_CITFR
Dihydrodipicolinate synthase {ECO:0000313|EMBL:KJC07418.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
dihydrodipicolinate synthase
L2_059_037G1_scaffold_39_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25938..26612
DNA (675bp) protein (225aa)
Protein yiim n=5 Tax=Citrobacter RepID=J1FZW3_9ENTR
Protein yiiM {ECO:0000313|EMBL:ETX67075.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
6-N-hydroxylaminopurine resistance protein
Displaying items 1-30 of 84 in total

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