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L2_059_037G1_scaffold_61

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_037G1_scaffold_61_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(306..776)
DNA (471bp) protein (157aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ser/Thr protein phosphatase family protein n=4 Tax=Clostridium perfringens RepID=H7CYV5_CLOPF
Ser/Thr protein phosphatase
L2_059_037G1_scaffold_61_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(788..1402)
DNA (615bp) protein (205aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BN08_CLOPF
putative deoxyribonucleotide triphosphate pyrophosphatase
L2_059_037G1_scaffold_61_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1404..2150)
DNA (747bp) protein (249aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Ribonuclease PH n=7 Tax=Clostridium perfringens RepID=RNPH_CLOPE
rph; ribonuclease PH
L2_059_037G1_scaffold_61_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2372..4075
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPH4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27446.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_059_037G1_scaffold_61_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4278..5798)
DNA (1521bp) protein (507aa)
Oligopeptide-binding protein n=1 Tax=Clostridium perfringens F262 RepID=H7CYV9_CLOPF
Oligopeptide-binding protein {ECO:0000313|EMBL:EIA16025.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
solute-binding family 5 protein
L2_059_037G1_scaffold_61_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5994..6458)
DNA (465bp) protein (155aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CYW0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16026.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_037G1_scaffold_61_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6582..6905
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BN03_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16023.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_059_037G1_scaffold_61_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6942..8930)
DNA (1989bp) protein (663aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3A7_CLOPF
L2_059_037G1_scaffold_61_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8968..11223)
DNA (2256bp) protein (752aa)
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQT5_CLOPS
L2_059_037G1_scaffold_61_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11435..12223)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BN00_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS78981.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_059_037G1_scaffold_61_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12240..12788)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQS0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16049.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_059_037G1_scaffold_61_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12790..13461)
DNA (672bp) protein (224aa)
Gram positive anchor protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TN55_CLOP1
anchor protein
Gram positive anchor protein {ECO:0000313|EMBL:EDS78974.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_059_037G1_scaffold_61_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14014..14733)
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Pseudouridine synthase n=7 Tax=Clostridium perfringens RepID=H7CYW7_CLOPF
16S pseudouridylate synthase
L2_059_037G1_scaffold_61_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15111..17171)
DNA (2061bp) protein (687aa)
Two component regulator three Y motif protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQS3_CLOPF
Two component regulator three Y motif protein {ECO:0000313|EMBL:EDT16040.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
triple tyrosine motif-containing protein
L2_059_037G1_scaffold_61_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17544..17993)
DNA (450bp) protein (150aa)
UPF0178 protein CPE2266 n=6 Tax=Clostridium perfringens RepID=Y2266_CLOPE
hypothetical protein
UPF0178 protein CPC_2571 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_059_037G1_scaffold_61_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18190..19542)
DNA (1353bp) protein (451aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Glucose-6-phosphate isomerase n=7 Tax=Clostridium perfringens RepID=G6PI_CLOP1
L2_059_037G1_scaffold_61_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19572..19781)
DNA (210bp) protein (70aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CYX1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27449.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_037G1_scaffold_61_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19983..20951)
DNA (969bp) protein (323aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=6 Tax=Clostridium perfringens RepID=Q0TN49_CLOP1
oligopeptide/dipeptide ABC transporter ATP-binding protein
Oligopeptide ABC transporter {ECO:0000313|EMBL:BAB81975.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_037G1_scaffold_61_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20952..21929)
DNA (978bp) protein (326aa)
Oligopeptide ABC transporter ATPase n=8 Tax=Clostridium perfringens RepID=H7CYX3_CLOPF
oligopeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT15977.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_037G1_scaffold_61_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21943..22857)
DNA (915bp) protein (305aa)
Oligopeptide ABC transporter permease component n=10 Tax=Clostridium perfringens RepID=H7CYX4_CLOPF
oligopeptide ABC transporter permease component
Oligopeptide/dipeptide ABC transporter, permease protein {ECO:0000313|EMBL:EDS78894.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_059_037G1_scaffold_61_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22872..23837)
DNA (966bp) protein (322aa)
Oligopeptide/dipeptide ABC transporter, permease protein n=9 Tax=Clostridium perfringens RepID=Q0TN46_CLOP1
appB; oligopeptide ABC transporter
Oligopeptide/dipeptide ABC transporter, permease protein {ECO:0000313|EMBL:EDT15936.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_037G1_scaffold_61_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23912..25654)
DNA (1743bp) protein (581aa)
Oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein n=1 Tax=Clostridium perfringens F262 RepID=H7CYX6_CLOPF
Oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein {ECO:0000313|EMBL:EIA16042.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
oligopeptide/dipeptide ABC transporter oligopeptide/dipeptide-binding protein
L2_059_037G1_scaffold_61_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26284..27576
DNA (1293bp) protein (431aa)
Major facilitator family transporter n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQT2_CLOPF
Major facilitator family transporter {ECO:0000313|EMBL:EDT15908.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
major facilitator family transporter
L2_059_037G1_scaffold_61_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27943..29472)
DNA (1530bp) protein (510aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=8 Tax=Clostridium perfringens RepID=GUAA_CLOPE
L2_059_037G1_scaffold_61_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29578..31032)
DNA (1455bp) protein (485aa)
inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Inosine-5'-monophosphate dehydrogenase n=9 Tax=Clostridium perfringens RepID=H7CYX9_CLOPF
L2_059_037G1_scaffold_61_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31741..35775)
DNA (4035bp) protein (1345aa)
von Willebrand factor type A domain protein n=1 Tax=Clostridium perfringens NCTC 8239 PF4_CLOPF">RepID=B1RPF4_CLOPF
von Willebrand factor type A domain protein {ECO:0000313|EMBL:EDT27377.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
von Willebrand factor type A domain-containing protein
L2_059_037G1_scaffold_61_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35797..36381)
DNA (585bp) protein (195aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REZ9_CLOPF
Prepilin peptidase-dependent {ECO:0000313|EMBL:EDT27414.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
prepilin peptidase-dependent
L2_059_037G1_scaffold_61_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36408..38663)
DNA (2256bp) protein (752aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF00_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27416.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_059_037G1_scaffold_61_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38665..39816)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF01_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27481.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_059_037G1_scaffold_61_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39837..41054)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMX0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS78984.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
Displaying items 1-30 of 55 in total

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