ggKbase home page

L2_059_037G1_scaffold_139

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_037G1_scaffold_139_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51..1019
DNA (969bp) protein (323aa)
Fimbrial outer membrane usher protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BPE2_CITFR
Outer membrane usher protein htrE {ECO:0000313|EMBL:KEL81892.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
outer membrane usher protein HtrE
L2_059_037G1_scaffold_139_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1023..1565
DNA (543bp) protein (181aa)
Fimbrial protein StkD n=2 Tax=Citrobacter RepID=M3D7F0_CITFR
Fimbrial protein {ECO:0000313|EMBL:KJC06206.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_059_037G1_scaffold_139_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1574..2155
DNA (582bp) protein (194aa)
Fimbrial protein StaF n=2 Tax=Citrobacter RepID=K8R2G6_CITFR
Fimbrial protein StaF {ECO:0000313|EMBL:KJC06207.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_059_037G1_scaffold_139_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2155..3252
DNA (1098bp) protein (366aa)
P pilus assembly protein, pilin FimA n=2 Tax=Citrobacter RepID=K8QXT0_CITFR
Pilus assembly protein FimA {ECO:0000313|EMBL:KJC06208.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_059_037G1_scaffold_139_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3302..4990)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8R6E9_CITFR
Chemotaxis protein {ECO:0000313|EMBL:KJC06209.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
chemotaxis protein
L2_059_037G1_scaffold_139_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5160..6278)
DNA (1119bp) protein (373aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284)
S-(Hydroxymethyl)glutathione dehydrogenase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QUC0_CITFR
L2_059_037G1_scaffold_139_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6311..6586)
DNA (276bp) protein (92aa)
Protein FrmR n=6 Tax=Citrobacter RepID=J0M3K1_9ENTR
Transcriptional repressor frmR {ECO:0000313|EMBL:KEL81886.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_059_037G1_scaffold_139_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6708..7166)
DNA (459bp) protein (153aa)
Exported protein n=6 Tax=Citrobacter RepID=J1G158_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX71019.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_059_037G1_scaffold_139_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7201..7803)
DNA (603bp) protein (201aa)
Inner membrane protein n=2 Tax=Citrobacter freundii RepID=K8QXS1_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX71020.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Putative inner membrane protein
L2_059_037G1_scaffold_139_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8328..11378
DNA (3051bp) protein (1017aa)
formate dehydrogenase (EC:1.2.1.2)
Formate dehydrogenase, nitrate-inducible, major subunit n=2 Tax=Citrobacter RepID=R8UZ72_9ENTR
Formate dehydrogenase, nitrate-inducible, major subunit {ECO:0000313|EMBL:ETX71021.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_059_037G1_scaffold_139_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11391..12278
DNA (888bp) protein (296aa)
formate dehydrogenase subunit beta (EC:1.2.1.2)
Formate dehydrogenase n=5 Tax=Citrobacter RepID=J0VPS4_9ENTR
Formate dehydrogenase {ECO:0000313|EMBL:KJC11265.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_059_037G1_scaffold_139_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12271..12924
DNA (654bp) protein (218aa)
Formate dehydrogenase-N subunit gamma n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D7F9_CITFR
Formate dehydrogenase {ECO:0000313|EMBL:KJC11266.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
formate dehydrogenase subunit gamma
L2_059_037G1_scaffold_139_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13047..14315)
DNA (1269bp) protein (423aa)
DNA polymerase V subunit UmuC n=2 Tax=Citrobacter freundii RepID=M3DX52_CITFR
Protein umuC {ECO:0000313|EMBL:ETX71024.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
umuC; DNA polymerase V UmuC
L2_059_037G1_scaffold_139_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14318..14737)
DNA (420bp) protein (140aa)
Protein umuD n=5 Tax=Citrobacter RepID=J0LX76_9ENTR
Protein umuD {ECO:0000313|EMBL:ETX71025.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
DNA polymerase V subunit UmuD
L2_059_037G1_scaffold_139_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14910..15440)
DNA (531bp) protein (177aa)
Cytochrome b561 n=6 Tax=Citrobacter RepID=J1G1C7_9ENTR
Cytochrome b561 {ECO:0000313|EMBL:KDF18042.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
cytochrome b561
L2_059_037G1_scaffold_139_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15630..16631
DNA (1002bp) protein (334aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=6 Tax=Citrobacter RepID=J0VPT0_9ENTR
L2_059_037G1_scaffold_139_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16758..17684
DNA (927bp) protein (309aa)
Pectin acetylesterase n=3 Tax=Citrobacter RepID=J0M3K8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX71028.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_037G1_scaffold_139_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17726..19165)
DNA (1440bp) protein (480aa)
Lactaldehyde dehydrogenase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UU80_9ENTR
Aldehyde dehydrogenase {ECO:0000313|EMBL:KJC11271.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
aldehyde dehydrogenase
L2_059_037G1_scaffold_139_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19365..20156)
DNA (792bp) protein (264aa)
Protein ydcF n=1 Tax=Citrobacter sp. KTE30 RepID=R8UVY5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC11272.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_037G1_scaffold_139_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20243..24145)
DNA (3903bp) protein (1301aa)
ATP-dependent RNA helicase hrpA n=3 Tax=Citrobacter RepID=J1G1D0_9ENTR
ATP-dependent helicase HrpA {ECO:0000313|EMBL:KJC11273.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ATP-dependent helicase HrpA
L2_059_037G1_scaffold_139_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24347..24952
DNA (606bp) protein (202aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
FMN-dependent NADH-azoreductase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UV25_9ENTR
FMN-dependent NADH-azoreductase
L2_059_037G1_scaffold_139_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25310..25636)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QL53_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX71033.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_037G1_scaffold_139_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25644..25835)
DNA (192bp) protein (64aa)
Outer membrane lipoprotein n=7 Tax=Citrobacter RepID=J1G173_9ENTR
Lipoprotein {ECO:0000313|EMBL:KJC12260.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
lipoprotein
L2_059_037G1_scaffold_139_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25832..28471)
DNA (2640bp) protein (880aa)
Periplasmic protein n=3 Tax=Citrobacter RepID=J0LX86_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC11284.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_037G1_scaffold_139_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28620..28832)
DNA (213bp) protein (71aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=J1G1D4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX63060.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L2_059_037G1_scaffold_139_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29087..30076
DNA (990bp) protein (330aa)
Lactate dehydrogenase {ECO:0000313|EMBL:KJC12262.1}; EC=1.1.1.28 {ECO:0000313|EMBL:KJC12262.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
lactate dehydrogenase (EC:1.1.1.28)
D-lactate dehydrogenase n=6 Tax=Citrobacter RepID=J0VPU0_9ENTR
L2_059_037G1_scaffold_139_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30189..30608
DNA (420bp) protein (140aa)
Heat-inducible protein n=3 Tax=Citrobacter RepID=K8QY37_CITFR
Heat-inducible protein {ECO:0000313|EMBL:KJC11286.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
heat-inducible protein
L2_059_037G1_scaffold_139_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30622..30888)
DNA (267bp) protein (89aa)
Cytoplasmic protein n=8 Tax=Enterobacteriaceae RepID=J1G177_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC11287.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_037G1_scaffold_139_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31163..34687
DNA (3525bp) protein (1175aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QNE6_CITFR
pyruvate-flavodoxin oxidoreductase
L2_059_037G1_scaffold_139_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35055..36182
DNA (1128bp) protein (376aa)
Outer membrane protein S2 n=1 Tax=Citrobacter sp. KTE30 RepID=R8UZ89_9ENTR
Outer membrane protein N {ECO:0000313|EMBL:KEL81855.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
porin
Displaying items 1-30 of 35 in total

View Taxonomy