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L2_059_037G1_scaffold_174

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_037G1_scaffold_174_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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235..1881
DNA (1647bp) protein (549aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
acetolactate synthase catalytic subunit (EC:2.2.1.6)
Acetolactate synthase n=3 Tax=Citrobacter RepID=K8QMA0_CITFR
L2_059_037G1_scaffold_174_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1878..2141
DNA (264bp) protein (88aa)
ilvM; acetolactate synthase 2 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase isozyme 2 small subunit n=10 Tax=Citrobacter RepID=C1MG27_9ENTR
Acetolactate synthase isozyme 2 small subunit {ECO:0000313|EMBL:KDF03632.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
L2_059_037G1_scaffold_174_3
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2159..3088
DNA (930bp) protein (310aa)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EFE07781.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EFE07781.1};; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
Branched-chain-amino-acid transaminase n=8 Tax=Enterobacteriaceae RepID=D4BE09_9ENTR
branched-chain amino acid aminotransferase
L2_059_037G1_scaffold_174_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3149..4999
DNA (1851bp) protein (617aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D3B0_CITFR
L2_059_037G1_scaffold_174_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5005..6549
DNA (1545bp) protein (515aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Threonine dehydratase biosynthetic n=6 Tax=Citrobacter RepID=C1MG30_9ENTR
ilvA; threonine deaminase
L2_059_037G1_scaffold_174_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6613..7806)
DNA (1194bp) protein (398aa)
Putative reductase P834_09144 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
trans-2-enoyl-CoA reductase (EC:1.3.1.-)
Putative reductase D186_19832 n=2 Tax=Citrobacter RepID=K8QMA3_CITFR
L2_059_037G1_scaffold_174_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7979..8881)
DNA (903bp) protein (301aa)
HTH-type transcriptional activator ilvY n=2 Tax=Citrobacter RepID=C1MG32_9ENTR
HTH-type transcriptional regulator IlvY {ECO:0000313|EMBL:CDL38375.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
transcriptional regulator
L2_059_037G1_scaffold_174_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9046..10521
DNA (1476bp) protein (492aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00185580}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Ketol-acid reductoisomerase n=12 Tax=Enterobacteriaceae RepID=G8WD67_KLEOK
L2_059_037G1_scaffold_174_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10641..10922)
DNA (282bp) protein (94aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Peptidyl-prolyl cis-trans isomerase C n=10 Tax=Enterobacteriaceae RepID=C1MG34_9ENTR
peptidylprolyl isomerase
L2_059_037G1_scaffold_174_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11007..13028
DNA (2022bp) protein (674aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
ATP-dependent DNA helicase rep n=7 Tax=Citrobacter RepID=C1MG35_9ENTR
ATP-dependent DNA helicase Rep
L2_059_037G1_scaffold_174_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13076..14557)
DNA (1482bp) protein (494aa)
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01550, ECO:0000256|SAAS:SAAS00181013}; EC=3.6.1.40 {ECO:0000256|HAMAP-Rule:MF_01550, ECO:0000256|SAAS:SAAS00181014};; Guanosine pentaphosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_01550}; pppGpp-5'-phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_01550}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
guanosine polyphosphate pyrophosphohydrolase (EC:3.6.1.40)
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase n=2 Tax=Citrobacter RepID=M3DRL0_CITFR
L2_059_037G1_scaffold_174_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14694..15962)
DNA (1269bp) protein (423aa)
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ATP-dependent RNA helicase RhlB n=6 Tax=Citrobacter RepID=J1FZG9_9ENTR
ATP-dependent RNA helicase RhlB
L2_059_037G1_scaffold_174_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16106..16435
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Escherichia coli MS 21-1 RepID=D8ADY2_ECOLX
Thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
L2_059_037G1_scaffold_174_14
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16773..18032
DNA (1260bp) protein (420aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Transcription termination factor Rho n=16 Tax=Enterobacteriaceae RepID=A8ACT5_CITK8
rho; transcription termination factor Rho
L2_059_037G1_scaffold_174_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18271..19374
DNA (1104bp) protein (368aa)
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase n=4 Tax=Citrobacter RepID=J1FZA4_9ENTR
UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:KJC03940.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase
L2_059_037G1_scaffold_174_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19387..20433
DNA (1047bp) protein (349aa)
Lipopolysaccharide biosynthesis protein wzzE n=2 Tax=Citrobacter freundii RepID=G9SDK5_CITFR
Lipopolysaccharide biosynthesis protein wzzE {ECO:0000313|EMBL:ETX60964.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
lipopolysaccharide biosynthesis protein WzzE
L2_059_037G1_scaffold_174_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20534..21619
DNA (1086bp) protein (362aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QJU3_CITFR
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ETX67703.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
UDP-N-acetylglucosamine 2-epimerase
L2_059_037G1_scaffold_174_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21616..22878
DNA (1263bp) protein (421aa)
UDP-N-acetyl-D-mannosamine dehydrogenase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWX8_CITFR
UDP-N-acetyl-D-mannosamine dehydrogenase {ECO:0000313|EMBL:KJC03937.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
wecC; UDP-N-acetyl-D-mannosamine dehydrogenase
L2_059_037G1_scaffold_174_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22875..23552
DNA (678bp) protein (226aa)
TDP-fucosamine acetyltransferase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QNT0_CITFR
TDP-D-fucosamine acetyltransferase {ECO:0000313|EMBL:KEL77615.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
TDP-fucosamine acetyltransferase
L2_059_037G1_scaffold_174_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23557..24687
DNA (1131bp) protein (377aa)
Lipopolysaccharide biosynthesis protein rffA n=1 Tax=Citrobacter sp. KTE30 RepID=R8UIS0_9ENTR
TDP-4-keto-6-deoxy-D-glucose transaminase family protein {ECO:0000313|EMBL:KEL77616.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
TDP-4-oxo-6-deoxy-D-glucose aminotransferase
L2_059_037G1_scaffold_174_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24689..25939
DNA (1251bp) protein (417aa)
Protein wzxE n=5 Tax=Citrobacter RepID=C1MG46_9ENTR
O-antigen translocase {ECO:0000313|EMBL:KJC06345.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
O-antigen translocase
L2_059_037G1_scaffold_174_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25936..27015
DNA (1080bp) protein (360aa)
TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase {ECO:0000256|HAMAP-Rule:MF_01002, ECO:0000256|SAAS:SAAS00151893}; EC=2.4.1.325 {ECO:0000256|HAMAP-Rule:MF_01002, ECO:0000256|SAAS:SAAS00151892};; 4-alpha-L-fucosyltransferase {ECO:0000256|HAMAP-Rule:MF_01002}; TDP-Fuc4NAc:lipid II Fuc4NAc transferase {ECO:0000256|HAMAP-Rule:MF_01002}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
4-alpha-L-fucosyltransferase n=3 Tax=Citrobacter RepID=J0M1M3_9ENTR
4-alpha-L-fucosyltransferase
L2_059_037G1_scaffold_174_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27012..28367
DNA (1356bp) protein (452aa)
Putative ECA polymerase n=6 Tax=Citrobacter RepID=J1FZB5_9ENTR
Probable ECA polymerase {ECO:0000256|HAMAP-Rule:MF_01003, ECO:0000256|SAAS:SAAS00275810}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
common antigen polymerase
L2_059_037G1_scaffold_174_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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28367..29107
DNA (741bp) protein (247aa)
UDP-N-acetyl-D-mannosaminuronic acid transferase {ECO:0000256|HAMAP-Rule:MF_01001, ECO:0000256|SAAS:SAAS00014171}; Short=UDP-ManNAcA transferase {ECO:0000256|HAMAP-Rule:MF_01001};; EC=2.4.1.180 {ECO:0000256|HAMAP-Rule:MF_01001, ECO:0000256|SAAS:SAAS00014176};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
UDP-N-acetyl-D-mannosaminuronic acid transferase n=7 Tax=Bacteria RepID=C1MG49_9ENTR
UDP-N-acetyl-D-mannosaminuronic acid transferase
L2_059_037G1_scaffold_174_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29385..30770
DNA (1386bp) protein (462aa)
Proline-specific permease n=4 Tax=Citrobacter RepID=J1FZI6_9ENTR
D-alanine/D-serine/glycine permease {ECO:0000313|EMBL:KJC06349.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
D-alanine/D-serine/glycine permease
Displaying 25 items

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