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L2_059_037G1_scaffold_201

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_037G1_scaffold_201_1
unknown

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comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

L2_059_037G1_scaffold_201_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(242..919)
DNA (678bp) protein (226aa)
Hydrolase, isochorismatase family n=5 Tax=Citrobacter RepID=J1G6V5_9ENTR
nicotinamidase
Nicotinamidase family protein YcaC {ECO:0000313|EMBL:CDL37196.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L2_059_037G1_scaffold_201_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(936..1796)
DNA (861bp) protein (287aa)
Pirin-like protein n=2 Tax=Citrobacter RepID=M3BCU6_CITFR
Quercetin 2,3-dioxygenase {ECO:0000313|EMBL:KJC08725.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
quercetin 2,3-dioxygenase
L2_059_037G1_scaffold_201_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1905..2816
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=2 Tax=Citrobacter RepID=M3CC57_CITFR
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDL37198.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
LysR family transcriptional regulator
L2_059_037G1_scaffold_201_5
Pantoea vagans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2896..3114)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=256 Tax=cellular organisms RepID=IF1_ENT38
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=712898 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)).;"
L2_059_037G1_scaffold_201_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3400..4104)
DNA (705bp) protein (235aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=5 Tax=Citrobacter RepID=J0M9R4_9ENTR
L2_059_037G1_scaffold_201_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4149..5870)
DNA (1722bp) protein (574aa)
Cysteine/glutathione ABC transporter membrane/ATP-binding component n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CVQ6_CITFR
Amino acid ABC transporter permease {ECO:0000313|EMBL:KJC08721.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
amino acid ABC transporter permease
L2_059_037G1_scaffold_201_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5871..7637)
DNA (1767bp) protein (589aa)
ATP-binding/permease CydD n=1 Tax=Citrobacter sp. KTE30 RepID=R8V3Y3_9ENTR
ATP-binding/permease CydD {ECO:0000313|EMBL:ETX70275.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
amino acid ABC transporter permease
L2_059_037G1_scaffold_201_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7752..8720)
DNA (969bp) protein (323aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Thioredoxin reductase n=4 Tax=Citrobacter RepID=K8QVQ8_CITFR
thioredoxin reductase
L2_059_037G1_scaffold_201_10
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9268..9762
DNA (495bp) protein (165aa)
Leucine-responsive regulatory protein n=28 Tax=Enterobacteriaceae RepID=LRP_KLEPN
lrp; Leucine-responsive regulatory protein
Leucine-responsive regulatory protein {ECO:0000313|EMBL:EKP26027.1}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
L2_059_037G1_scaffold_201_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9897..13958
DNA (4062bp) protein (1354aa)
DNA translocase FtsK n=2 Tax=Citrobacter RepID=K8R5Y7_CITFR
cell division protein FtsK
Cell division protein FtsK {ECO:0000313|EMBL:AHY12679.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_059_037G1_scaffold_201_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14070..14681
DNA (612bp) protein (204aa)
Outer-membrane lipoprotein carrier protein n=7 Tax=Citrobacter RepID=C1M9H7_9ENTR
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
lolA; lipoprotein chaperone
L2_059_037G1_scaffold_201_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14692..16035
DNA (1344bp) protein (448aa)
Replication-associated recombination protein A n=4 Tax=Citrobacter RepID=C1M9H8_9ENTR
Replication-associated recombination protein A {ECO:0000313|EMBL:KEL82685.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
recombination factor protein RarA
L2_059_037G1_scaffold_201_14
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16128..17420
DNA (1293bp) protein (431aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Serine--tRNA ligase n=3 Tax=Citrobacter RepID=J0VVP7_9ENTR
seryl-tRNA synthetase
L2_059_037G1_scaffold_201_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17657..18088
DNA (432bp) protein (144aa)
Anaerobic dimethyl sulfoxide reductase chain A {ECO:0000313|EMBL:CDL37217.1}; EC=1.8.99.- {ECO:0000313|EMBL:CDL37217.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Anaerobic dimethyl sulfoxide reductase n=3 Tax=Citrobacter RepID=J0M9S5_9ENTR
dimethyl sulfoxide reductase
L2_059_037G1_scaffold_201_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18107..20101
DNA (1995bp) protein (665aa)
Anaerobic dimethyl sulfoxide reductase chain A {ECO:0000313|EMBL:CDL37217.1}; EC=1.8.99.- {ECO:0000313|EMBL:CDL37217.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Anaerobic dimethyl sulfoxide reductase subunit A n=2 Tax=Citrobacter RepID=K8QXC4_CITFR
dimethyl sulfoxide reductase
L2_059_037G1_scaffold_201_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20112..20729
DNA (618bp) protein (206aa)
Anaerobic dimethylsulfoxide reductase subunit B n=2 Tax=Citrobacter RepID=K8R5Y1_CITFR
Dimethylsulfoxide reductase, chain B {ECO:0000313|EMBL:KEL82682.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
dimethyl sulfoxide reductase
L2_059_037G1_scaffold_201_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20731..21594
DNA (864bp) protein (288aa)
Anaerobic dimethyl sulfoxide reductase subunit C n=5 Tax=Citrobacter RepID=J0M308_9ENTR
Anaerobic dimethyl sulfoxide reductase chain C {ECO:0000313|EMBL:ETX70284.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
dimethyl sulfoxide reductase
L2_059_037G1_scaffold_201_19
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21704..22330)
DNA (627bp) protein (209aa)
Hydrolase n=2 Tax=Citrobacter RepID=R8VGH6_9ENTR
hypothetical protein
Hydrolase {ECO:0000313|EMBL:EOQ50516.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
L2_059_037G1_scaffold_201_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22715..23863
DNA (1149bp) protein (383aa)
Uncharacterized MFS-type transporter D186_05105 n=3 Tax=Citrobacter RepID=K8R1Z1_CITFR
Uncharacterized MFS-type transporter YcaD {ECO:0000256|HAMAP-Rule:MF_01149}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
MFS transporter
L2_059_037G1_scaffold_201_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24077..25498
DNA (1422bp) protein (474aa)
Inner membrane transporter ycaM n=8 Tax=Citrobacter RepID=C1M9I5_9ENTR
Transporter {ECO:0000313|EMBL:KJC08580.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transporter
L2_059_037G1_scaffold_201_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25542..26282)
DNA (741bp) protein (247aa)
pflA; pyruvate formate lyase-activating enzyme 1 (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Pyruvate formate-lyase 1-activating enzyme n=11 Tax=Citrobacter RepID=D4BBW4_9ENTR
L2_059_037G1_scaffold_201_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26468..27364)
DNA (897bp) protein (299aa)
pyruvate formate-lyase (EC:2.3.1.54)
Formate acetyltransferase {ECO:0000313|EMBL:KEL82676.1}; EC=2.3.1.54 {ECO:0000313|EMBL:KEL82676.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Formate C-acetyltransferase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBW3_9ENTR
Displaying 23 items

View Taxonomy