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L2_059_037G1_scaffold_234

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_037G1_scaffold_234_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(437..892)
DNA (456bp) protein (152aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
S-ribosylhomocysteine lyase n=6 Tax=Clostridium perfringens RepID=LUXS_CLOPE
luxS; S-ribosylhomocysteinase
L2_059_037G1_scaffold_234_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(990..1898)
DNA (909bp) protein (303aa)
Cysteine synthase n=2 Tax=Clostridium perfringens RepID=I1SBA7_CLOPE
cysK; cysteine synthase
Cysteine synthase {ECO:0000313|EMBL:BAB79883.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_037G1_scaffold_234_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1885..3039)
DNA (1155bp) protein (385aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:EDT15473.1}; EC=4.4.1.8 {ECO:0000313|EMBL:EDT15473.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Cystathionine beta-lyase n=2 Tax=Clostridium perfringens RepID=B1BS21_CLOPF
metB; cystathionine beta-lyase
L2_059_037G1_scaffold_234_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3103..3726)
DNA (624bp) protein (208aa)
UbiE/COQ5 family methyltransferase n=6 Tax=Clostridium perfringens RepID=H7CRX3_CLOPF
Methyltransferase, UbiE/COQ5 family {ECO:0000313|EMBL:EDT23890.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
UbiE/COQ5 family methlytransferase
L2_059_037G1_scaffold_234_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4471..4929
DNA (459bp) protein (153aa)
Large-conductance mechanosensitive channel n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKL0_CLOPF
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
mscL; large-conductance mechanosensitive channel
L2_059_037G1_scaffold_234_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5077..8391)
DNA (3315bp) protein (1105aa)
Microbial collagenase n=2 Tax=Clostridium perfringens RepID=B1RQY6_CLOPF
Collagenase {ECO:0000313|EMBL:EIA18611.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
colA; collagenase
L2_059_037G1_scaffold_234_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8928..9383)
DNA (456bp) protein (152aa)
Arginine regulator n=6 Tax=Clostridium perfringens RepID=ARGR1_CLOPE
argR; arginine repressor ArgR
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_037G1_scaffold_234_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9457..10401)
DNA (945bp) protein (315aa)
arcC; carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=5 Tax=Clostridium perfringens RepID=H7CRW9_CLOPF
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_059_037G1_scaffold_234_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10462..11898)
DNA (1437bp) protein (479aa)
Arginine/ornithine antiporter n=2 Tax=Clostridium perfringens RepID=ARCD_CLOPE
arcD; arginine/ornithine antiporter
Arginine/ornithine antiporter; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_037G1_scaffold_234_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12038..13033)
DNA (996bp) protein (332aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ornithine carbamoyltransferase, catabolic n=8 Tax=Clostridium perfringens RepID=OTCC_CLOP1
L2_059_037G1_scaffold_234_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13142..14383)
DNA (1242bp) protein (414aa)
arcA; arginine deiminase (EC:3.5.3.6)
Arginine deiminase {ECO:0000255|HAMAP-Rule:MF_00242}; Short=ADI {ECO:0000255|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000255|HAMAP-Rule:MF_00242};; Arginine dihydrolase {ECO:0000255|HAMAP-Rule:MF_00242}; Short=AD {ECO:0000255|HAMAP-Rule:MF_00242};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Arginine deiminase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=ARCA_CLOPS
L2_059_037G1_scaffold_234_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14817..16886)
DNA (2070bp) protein (690aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Beta-galactosidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XP01_CLOPE
pbg; beta-galactosidase
L2_059_037G1_scaffold_234_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17045..18532)
DNA (1488bp) protein (496aa)
Amino acid permease family protein n=2 Tax=Clostridium perfringens RepID=Q0TUR7_CLOP1
amino acid permease
Membrane-spanning transporter protein {ECO:0000313|EMBL:BAA08484.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
L2_059_037G1_scaffold_234_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19300..19518)
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q0SWK9_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85378.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_059_037G1_scaffold_234_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19590..20048)
DNA (459bp) protein (153aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRW3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27332.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_037G1_scaffold_234_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20245..21747)
DNA (1503bp) protein (501aa)
Perfringolysin O n=5 Tax=Clostridium perfringens RepID=TACY_CLOPE
pfoA; perfringolysin O
Perfringolysin O {ECO:0000313|EMBL:EDT72440.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_059_037G1_scaffold_234_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22336..23367)
DNA (1032bp) protein (344aa)
Regulatory protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XP04_CLOPE
pfoR; regulatory protein
Regulatory protein {ECO:0000313|EMBL:BAB79868.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_037G1_scaffold_234_18
unknown

Not on your lists

comp(23757..23867)
DNA (111bp) protein (37aa)

This feature has no annotations

L2_059_037G1_scaffold_234_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23888..24499)
DNA (612bp) protein (204aa)
Protein T24A6.7 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWL2_CLOPS
hypothetical protein
Protein T24A6.7 {ECO:0000313|EMBL:ABG85925.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Displaying 19 items

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