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L2_059_037G1_scaffold_284

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_037G1_scaffold_284_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1202..1894
DNA (693bp) protein (231aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CN80_CLOPF
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
sfsA; sugar fermentation stimulation protein A
L2_059_037G1_scaffold_284_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2308..2847
DNA (540bp) protein (180aa)
NUDIX family hydrolase n=5 Tax=Clostridium perfringens RepID=H7CT33_CLOPF
NUDIX family hydrolase
NUDIX family hydrolase {ECO:0000313|EMBL:EIA17835.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_037G1_scaffold_284_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3258..4553
DNA (1296bp) protein (432aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Diaminopimelate decarboxylase n=5 Tax=Clostridium perfringens RepID=Q0TTL1_CLOP1
L2_059_037G1_scaffold_284_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5010..5228
DNA (219bp) protein (73aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XMU2_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17837.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_037G1_scaffold_284_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5231..5761
DNA (531bp) protein (177aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Signal peptidase I n=9 Tax=Clostridium perfringens RepID=H7CT36_CLOPF
L2_059_037G1_scaffold_284_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5786..7927
DNA (2142bp) protein (714aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Clostridium perfringens RepID=H7CT37_CLOPF
ftsH; ATP-dependent metalloprotease FtsH
L2_059_037G1_scaffold_284_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8148..10268
DNA (2121bp) protein (707aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Putative helicase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RST1_CLOPF
helicase
L2_059_037G1_scaffold_284_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10724..11560
DNA (837bp) protein (279aa)
Amino acid ABC transporter, amino acid-binding protein n=2 Tax=Clostridium perfringens RepID=B1BEY5_CLOPF
Amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:EDS81638.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
amino acid ABC transporter
L2_059_037G1_scaffold_284_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11591..12265
DNA (675bp) protein (225aa)
His/Glu/Gln/Arg/opine ABC transporter permease n=2 Tax=Clostridium perfringens RepID=H7CT40_CLOPF
His/Glu/Gln/Arg/opine ABC transporter permease {ECO:0000313|EMBL:EIA17842.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
His/Glu/Gln/Arg/opine ABC transporter permease
L2_059_037G1_scaffold_284_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12259..12981
DNA (723bp) protein (241aa)
Amino acid ABC transporter, ATP-binding protein n=2 Tax=Clostridium perfringens RepID=Q0TTK4_CLOP1
amino acid ABC transporter
Probable amino acid ABC transporter {ECO:0000313|EMBL:BAB80308.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_037G1_scaffold_284_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13199..15007
DNA (1809bp) protein (603aa)
Sulfatase family protein n=3 Tax=Clostridium perfringens RepID=Q0TTK3_CLOP1
Sulfatase family protein {ECO:0000313|EMBL:EDT14521.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
sulfatase
L2_059_037G1_scaffold_284_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15259..17103
DNA (1845bp) protein (615aa)
Sulfatase domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3V8_CLOPF
Sulfatase domain protein {ECO:0000313|EMBL:EDT71511.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
sulfatase
L2_059_037G1_scaffold_284_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17206..18387)
DNA (1182bp) protein (394aa)
Cation efflux family protein n=4 Tax=Clostridium perfringens RepID=H7CT44_CLOPF
Cation efflux family protein {ECO:0000313|EMBL:EDT71490.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
cation efflux family protein
L2_059_037G1_scaffold_284_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18630..19871
DNA (1242bp) protein (414aa)
Putative enterotoxin, EntD n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTK0_CLOP1
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase, family 2 {ECO:0000313|EMBL:EDT14548.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Displaying 14 items

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