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L2_059_037G1_scaffold_393

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_037G1_scaffold_393_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(165..731)
DNA (567bp) protein (189aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
D,D-heptose 1,7-bisphosphate phosphatase n=6 Tax=Citrobacter RepID=G9SDS4_CITFR
D,D-heptose 1,7-bisphosphate phosphatase
L2_059_037G1_scaffold_393_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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921..1952
DNA (1032bp) protein (344aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
DL-methionine transporter ATP-binding subunit n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWR0_CITFR
metN; DL-methionine transporter ATP-binding subunit
L2_059_037G1_scaffold_393_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1945..2598
DNA (654bp) protein (218aa)
D-methionine transport system permease metI n=7 Tax=Citrobacter RepID=C1MCW7_9ENTR
DL-methionine transporter permease subunit {ECO:0000313|EMBL:KKC63622.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
DL-methionine transporter permease subunit
L2_059_037G1_scaffold_393_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2643..3458
DNA (816bp) protein (272aa)
Lipoprotein n=6 Tax=Citrobacter RepID=J0VQT1_9ENTR
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
metQ; DL-methionine transporter substrate-binding subunit
L2_059_037G1_scaffold_393_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3575..3979
DNA (405bp) protein (135aa)
Protein rcsF n=8 Tax=Citrobacter RepID=C1MCW5_9ENTR
Outer membrane lipoprotein RcsF {ECO:0000256|HAMAP-Rule:MF_00976}; Flags: Precursor;; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
rcsF; membrane protein
L2_059_037G1_scaffold_393_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3976..4683
DNA (708bp) protein (236aa)
UPF0066 protein yaeB n=4 Tax=Citrobacter RepID=J1G245_9ENTR
tRNA (Adenine(37)-N6)-methyltransferase {ECO:0000313|EMBL:KJC03599.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_037G1_scaffold_393_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4797..6515
DNA (1719bp) protein (573aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
proline--tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase n=4 Tax=Citrobacter RepID=J0LY70_9ENTR
L2_059_037G1_scaffold_393_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6560..7255)
DNA (696bp) protein (232aa)
Lipoprotein NlpE n=7 Tax=Citrobacter RepID=C1MCW2_9ENTR
Copper homeostasis protein CutF / Lipoprotein NlpE involeved in surface adhesion {ECO:0000313|EMBL:CDL37356.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
copper homeostasis protein
L2_059_037G1_scaffold_393_9

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comp(7289..7711)
DNA (423bp) protein (141aa)
Uncharacterized protein n=8 Tax=Bacteria RepID=K8QTB2_CITFR
Putative peptidyl-tRNA hydrolase domain protein {ECO:0000313|EMBL:ACT97351.1}; TaxID=663085 species="Bacteria.;" source="mixed culture bacterium AM_gF3SD01_01.;"
hypothetical protein
L2_059_037G1_scaffold_393_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7708..8253)
DNA (546bp) protein (182aa)
Uncharacterized protein n=9 Tax=Bacteria RepID=C1MCW0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72255.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_037G1_scaffold_393_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8442..8642
DNA (201bp) protein (67aa)
UPF0253 protein CSAG_03497 n=10 Tax=Citrobacter RepID=C1MCV9_9ENTR
UPF0253 protein TO64_25460 {ECO:0000256|HAMAP-Rule:MF_01064}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_037G1_scaffold_393_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8629..8889
DNA (261bp) protein (87aa)
Protein rof n=8 Tax=Citrobacter RepID=C1MCV8_9ENTR
Rho-binding antiterminator
Protein rof {ECO:0000313|EMBL:ETX65887.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_059_037G1_scaffold_393_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8953..10245)
DNA (1293bp) protein (431aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BGL9_CITFR
tilS; tRNA(Ile)-lysidine ligase
L2_059_037G1_scaffold_393_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10307..10696)
DNA (390bp) protein (130aa)
Glyoxylase family protein n=6 Tax=Citrobacter RepID=J0VQT9_9ENTR
Glyoxylase {ECO:0000313|EMBL:ETX72251.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
lyase
L2_059_037G1_scaffold_393_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10763..12901)
DNA (2139bp) protein (713aa)
lysine decarboxylase LdcC (EC:4.1.1.18)
Lysine decarboxylase 2 n=6 Tax=Citrobacter RepID=J0M4L5_9ENTR
Lysine decarboxylase, constitutive {ECO:0000313|EMBL:ETX72250.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_059_037G1_scaffold_393_16
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13001..13960)
DNA (960bp) protein (320aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=8 Tax=Citrobacter RepID=J1G255_9ENTR
acetyl-CoA carboxylase carboxyltransferase subunit alpha
L2_059_037G1_scaffold_393_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13973..14227)
DNA (255bp) protein (85aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
DNA polymerase III subunit alpha n=1 Tax=Escherichia coli P0304777.13 RepID=N3V5A0_ECOLX
DNA polymerase III subunit alpha
Displaying 17 items

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