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L2_059_038G1_scaffold_20

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Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_038G1_scaffold_20_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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237..2162
DNA (1926bp) protein (642aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TPX9_CLOP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDS81217.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_059_038G1_scaffold_20_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2600..5854)
DNA (3255bp) protein (1085aa)
Helicase, SNF2/RAD54 family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSV2_CLOPF
SWI/SNF family helicase {ECO:0000313|EMBL:BAB81331.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
helicase, SNF2/RAD54 family
L2_059_038G1_scaffold_20_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6032..7033)
DNA (1002bp) protein (334aa)
Transcriptional regulator, LacI family n=4 Tax=Clostridium perfringens RepID=B1BVY7_CLOPF
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDT27127.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
LacI family transcription regulator
L2_059_038G1_scaffold_20_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7172..8077)
DNA (906bp) protein (302aa)
Ribose ABC transporter, ribose-binding protein n=2 Tax=Clostridium perfringens RepID=B1R4V0_CLOPF
Ribose ABC transporter, ribose-binding protein {ECO:0000313|EMBL:EDT27108.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
rbsB; ABC-type sugar transport system, periplasmic component
L2_059_038G1_scaffold_20_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8099..9034)
DNA (936bp) protein (312aa)
Ribose ABC transporter, permease protein n=7 Tax=Clostridium perfringens RepID=H7CX09_CLOPF
rbsC; ribose ABC transporter permease
Ribose ABC transporter, permease protein {ECO:0000313|EMBL:EIA16910.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_038G1_scaffold_20_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9048..10553)
DNA (1506bp) protein (502aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Ribose import ATP-binding protein RbsA n=6 Tax=Clostridium perfringens RepID=RBSA_CLOP1
rbsA; ribose ABC transporter ATP-binding protein
L2_059_038G1_scaffold_20_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10639..11034)
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
D-ribose pyranase n=5 Tax=Clostridium perfringens RepID=RBSD_CLOP1
rbsD; D-ribose pyranase
L2_059_038G1_scaffold_20_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11037..11969)
DNA (933bp) protein (311aa)
Ribokinase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJX1_CLOPE
rbsK; ribokinase
Ribokinase {ECO:0000313|EMBL:BAB81338.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_038G1_scaffold_20_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12110..12577)
DNA (468bp) protein (156aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Peptide deformylase 2 n=5 Tax=Clostridium perfringens RepID=DEF2_CLOPE
def; polypeptide deformylase
L2_059_038G1_scaffold_20_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12733..13692)
DNA (960bp) protein (320aa)
glycoside hydrolase family protein (EC:2.7.8.-)
Glycosyl transferase, group 4 family protein {ECO:0000313|EMBL:EDT14147.1}; EC=2.7.8.- {ECO:0000313|EMBL:EDT14147.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Glycosyl transferase, group 4 family protein n=5 Tax=Clostridium perfringens RepID=H7CX14_CLOPF
L2_059_038G1_scaffold_20_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13838..14404)
DNA (567bp) protein (189aa)
Probable transcriptional regulator n=8 Tax=Clostridium perfringens RepID=Q8XJW8_CLOPE
transcriptional regulatory protein
Putative transcriptional regulatory protein {ECO:0000313|EMBL:EDT14145.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_038G1_scaffold_20_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14620..15264)
DNA (645bp) protein (215aa)
V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=10 Tax=Clostridium perfringens RepID=H7CX16_CLOPF
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_038G1_scaffold_20_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15267..16649)
DNA (1383bp) protein (461aa)
V-type ATP synthase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=10 Tax=Clostridium perfringens RepID=VATB_CLOP1
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_059_038G1_scaffold_20_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16642..18417)
DNA (1776bp) protein (592aa)
V-type ATP synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000255|HAMAP-Rule:MF_00309}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
ntpA; V-type ATP synthase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=8 Tax=Clostridium perfringens RepID=VATA_CLOP1
L2_059_038G1_scaffold_20_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18434..18751)
DNA (318bp) protein (106aa)
V-type ATP synthase subunit F (EC:3.6.3.14)
V-type ATP synthase subunit F n=11 Tax=Clostridium perfringens RepID=VATF_CLOPE
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_038G1_scaffold_20_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18738..19745)
DNA (1008bp) protein (336aa)
ntpC; V-type ATP synthase subunit C (EC:3.6.3.14)
V-type sodium ATP synthase subunit C n=4 Tax=Clostridium perfringens RepID=Q8XJW3_CLOPE
V-type sodium ATP synthase subunit C {ECO:0000313|EMBL:BAB81346.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_038G1_scaffold_20_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19758..20354)
DNA (597bp) protein (199aa)
V-type ATP synthase subunit E n=9 Tax=Clostridium perfringens RepID=VATE_CLOP1
V-type ATPase, E subunit
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_038G1_scaffold_20_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20382..20876)
DNA (495bp) protein (165aa)
V-type ATP synthase subunit K (EC:3.6.3.14)
V-type ATP synthase subunit K n=3 Tax=Clostridium perfringens RepID=H7CX22_CLOPF
V-type ATPase, K subunit {ECO:0000313|EMBL:EDS81150.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_059_038G1_scaffold_20_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20931..22877)
DNA (1947bp) protein (649aa)
V-type ATP synthase subunit I (EC:3.6.3.14)
V-type ATPase, I subunit n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SSH7_CLOPS
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_059_038G1_scaffold_20_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22864..23190)
DNA (327bp) protein (109aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CX24_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16925.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_038G1_scaffold_20_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23467..24945)
DNA (1479bp) protein (493aa)
Radical SAM domain protein n=2 Tax=Clostridium perfringens RepID=Q0TPW0_CLOP1
radical SAM domain-containing protein
Radical SAM domain-containing protein {ECO:0000313|EMBL:EIA16926.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_038G1_scaffold_20_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25019..25648)
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XJV7_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27073.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_038G1_scaffold_20_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25795..27081)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CX27_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16928.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_059_038G1_scaffold_20_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27229..28758
DNA (1530bp) protein (510aa)
Stage V sporulation protein B n=3 Tax=Clostridium perfringens RepID=H7CX28_CLOPF
Stage V sporulation protein B {ECO:0000313|EMBL:EIA16929.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
spoVB; stage V sporulation protein B
L2_059_038G1_scaffold_20_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28852..29652)
DNA (801bp) protein (267aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4Y4_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EDT71137.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_059_038G1_scaffold_20_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29762..30604)
DNA (843bp) protein (281aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1RQ08_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT71143.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_059_038G1_scaffold_20_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30616..31119)
DNA (504bp) protein (168aa)
Hexapeptide repeat-containing transferase n=9 Tax=Clostridium perfringens RepID=H7CX31_CLOPF
hexapeptide repeat-containing transferase
Bacterial transferase hexpeptide repeat protein {ECO:0000313|EMBL:EDT14138.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_038G1_scaffold_20_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31368..32369
DNA (1002bp) protein (334aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1RAL0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT22743.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L2_059_038G1_scaffold_20_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32397..32747)
DNA (351bp) protein (117aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XJV0_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81359.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_038G1_scaffold_20_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32967..33437
DNA (471bp) protein (157aa)
Transcriptional regulator, AsnC family n=7 Tax=Clostridium perfringens RepID=Q0TPV1_CLOP1
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EDT14124.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Displaying items 1-30 of 113 in total

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