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L2_059_038G1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_038G1_scaffold_56_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

279..1604
DNA (1326bp) protein (442aa)
FolC bifunctional protein {ECO:0000313|EMBL:EDT26564.1}; EC=6.3.2.12 {ECO:0000313|EMBL:EDT26564.1};; EC=6.3.2.17 {ECO:0000313|EMBL:EDT26564.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
FolC bifunctional protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHM7_CLOPF
L2_059_038G1_scaffold_56_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1715..3274
DNA (1560bp) protein (520aa)
Voltage-gated chloride channel family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V015_CLOPF
Voltage-gated chloride channel family protein {ECO:0000313|EMBL:EDT16228.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_059_038G1_scaffold_56_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3387..3881)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ45_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81622.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_038G1_scaffold_56_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4007..4648
DNA (642bp) protein (214aa)
Probable hemolysin III n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ46_CLOPE
hlyE; hemolysin III
Probable hemolysin III {ECO:0000313|EMBL:BAB81621.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_038G1_scaffold_56_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4703..6127)
DNA (1425bp) protein (475aa)
Cell envelope-related transcriptional attenuator domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHN1_CLOPF
Cell envelope-related transcriptional attenuator domain protein {ECO:0000313|EMBL:EDT26570.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
cell envelope-related function transcriptional attenuator
L2_059_038G1_scaffold_56_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6299..7405)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q8XJ48_CLOPE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT16266.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_038G1_scaffold_56_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7471..8001)
DNA (531bp) protein (177aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CX45_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16759.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_038G1_scaffold_56_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8109..8999
DNA (891bp) protein (297aa)
Polysaccharide deacetylase family protein n=3 Tax=Clostridium perfringens RepID=Q0TP49_CLOP1
polysaccharide deacetylase
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EDT25306.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_059_038G1_scaffold_56_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9001..9657
DNA (657bp) protein (219aa)
Single-stranded DNA-binding protein n=8 Tax=Clostridium perfringens RepID=H7CX43_CLOPF
single-stranded DNA-binding protein
Single-strand binding domain protein {ECO:0000313|EMBL:EDT25246.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_059_038G1_scaffold_56_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9707..10417)
DNA (711bp) protein (237aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01691}; EC=2.3.1.89 {ECO:0000255|HAMAP-Rule:MF_01691};; Tetrahydrodipicolinate N-acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01691}; Short=THP acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01691};; Short=Tetrahydropicolinate acetylase {ECO:0000255|HAMAP-Rule:MF_01691};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase n=8 Tax=Clostridium perfringens RepID=DAPH_CLOP1
dapD; tetrahydrodipicolinate succinylase
L2_059_038G1_scaffold_56_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10611..11147
DNA (537bp) protein (179aa)
Probable cob(I)alamin adenosyltransferase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ53_CLOPE
cob(I)alamin adenosyltransferase
Probable cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:BAB81614.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_038G1_scaffold_56_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11147..12289
DNA (1143bp) protein (381aa)
Probable asparate aminotransferase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ54_CLOPE
patA; asparate aminotransferase
Probable asparate aminotransferase {ECO:0000313|EMBL:BAB81613.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_038G1_scaffold_56_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12585..13349)
DNA (765bp) protein (255aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000255|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000255|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000255|HAMAP-Rule:MF_00102};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=DAPB_CLOPE
L2_059_038G1_scaffold_56_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13422..14297)
DNA (876bp) protein (292aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=DAPA_CLOPE
L2_059_038G1_scaffold_56_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14322..15299)
DNA (978bp) protein (326aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ57_CLOPE
asd; aspartate-semialdehyde dehydrogenase
L2_059_038G1_scaffold_56_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15501..15773
DNA (273bp) protein (91aa)
Small acid-soluble spore protein beta n=10 Tax=Clostridium perfringens RepID=H7CX36_CLOPF
beta type small acid-soluble spore protein
Small acid-soluble spore protein beta {ECO:0000313|EMBL:EIA16750.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_038G1_scaffold_56_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15840..16562
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V7G1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT70258.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_059_038G1_scaffold_56_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16578..17537
DNA (960bp) protein (320aa)
33 kDa chaperonin n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIW2_CLOPF
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hslO; Hsp33-like chaperonin
L2_059_038G1_scaffold_56_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18018..18395)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R332_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25302.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_059_038G1_scaffold_56_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18694..19248
DNA (555bp) protein (185aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CXU1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16746.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_059_038G1_scaffold_56_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19414..19968
DNA (555bp) protein (185aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CXU0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16745.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_038G1_scaffold_56_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20101..21081)
DNA (981bp) protein (327aa)
BadF/BadG/BcrA/BcrD ATPase family protein n=5 Tax=Clostridium perfringens RepID=B1BIW6_CLOPF
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:EDT13318.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
BadF/BadG/BcrA/BcrD ATPase
L2_059_038G1_scaffold_56_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21336..22031)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIW7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS80340.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_059_038G1_scaffold_56_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22166..23044
DNA (879bp) protein (293aa)
Putative sporulation protein YtxC n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V7G8_CLOPF
Putative sporulation protein YtxC {ECO:0000313|EMBL:EDT70252.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
sporulation protein YtxC
L2_059_038G1_scaffold_56_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23325..23846
DNA (522bp) protein (174aa)
Translation initiation factor IF-3 n=5 Tax=Clostridium perfringens RepID=H7CXT6_CLOPF
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
infC; translation initiation factor IF-3
L2_059_038G1_scaffold_56_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23868..24065
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=9 Tax=Clostridium perfringens RepID=RL35_CLOP1
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_038G1_scaffold_56_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24095..24454
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=10 Tax=Clostridium perfringens RepID=RL20_CLOP1
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_059_038G1_scaffold_56_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24683..26023
DNA (1341bp) protein (447aa)
Potassium uptake protein, TrkH family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BT20_CLOPF
TrkH family potassium uptake protein
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EDT25839.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_038G1_scaffold_56_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26046..26711
DNA (666bp) protein (222aa)
Probable potassium uptake system protein n=10 Tax=Clostridium perfringens RepID=Q8XJ71_CLOPE
potassium uptake protein
Putative potassium uptake protein {ECO:0000313|EMBL:EDT15096.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_038G1_scaffold_56_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26737..27510
DNA (774bp) protein (258aa)
RNA methyltransferase, TrmH family n=4 Tax=Clostridium perfringens RepID=B1RB42_CLOPF
TrmH family RNA methyltransferase
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EDT25840.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Displaying items 1-30 of 71 in total

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