ggKbase home page

L2_059_038G1_scaffold_309

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_038G1_scaffold_309_1
Raoultella planticola, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1948
DNA (1947bp) protein (649aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1005996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella planticola ATCC 33531.;"
ATP-dependent RNA helicase DeaD n=2 Tax=Enterobacteriaceae RepID=M9W846_RAOOR
ATP-dependent RNA helicase DeaD
L2_059_038G1_scaffold_309_2
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2091..3335
DNA (1245bp) protein (415aa)
Tryptophan permease n=2 Tax=Enterobacteriaceae RepID=M9W7G8_RAOOR
tryptophan permease
Tryptophan permease {ECO:0000313|EMBL:KIZ46729.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
L2_059_038G1_scaffold_309_3
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3521..4528)
DNA (1008bp) protein (336aa)
Luciferase family oxidoreductase, group 1 n=1 Tax=Klebsiella oxytoca 10-5246 RepID=H3MSX8_KLEOX
Luciferase family oxidoreductase, group 1 {ECO:0000313|EMBL:EHT05274.1}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
hypothetical protein
L2_059_038G1_scaffold_309_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4671..5549)
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Klebsiella oxytoca 10-5246 RepID=H3MSX7_KLEOX
Peptidase U32 family protein {ECO:0000313|EMBL:KDV91539.1}; TaxID=1444039 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S1_C1.;"
protease
L2_059_038G1_scaffold_309_5
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5558..6553)
DNA (996bp) protein (332aa)
Peptidase U32 n=2 Tax=Enterobacteriaceae RepID=M9WBX3_RAOOR
peptidase U32
Protease {ECO:0000313|EMBL:KGZ15515.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae.;"
L2_059_038G1_scaffold_309_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6775..7299
DNA (525bp) protein (175aa)
Lipid carrier protein n=2 Tax=Enterobacteriaceae RepID=M9W850_RAOOR
lipid carrier protein
Uncharacterized protein {ECO:0000313|EMBL:KDV91537.1}; TaxID=1444039 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S1_C1.;"
L2_059_038G1_scaffold_309_7
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7293..7796
DNA (504bp) protein (168aa)
N-acetyltransferase GCN5 n=2 Tax=Enterobacteriaceae RepID=M9W7H2_RAOOR
N-acetyltransferase GCN5
Uncharacterized protein {ECO:0000313|EMBL:EHT05270.1}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
L2_059_038G1_scaffold_309_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7783..8067)
DNA (285bp) protein (95aa)
GIY-YIG nuclease superfamily protein n=2 Tax=Enterobacteriaceae RepID=M9W4N5_RAOOR
GIY-YIG nuclease superfamily protein
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:KDX11697.1}; TaxID=1444067 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S1_C2.;"
L2_059_038G1_scaffold_309_9
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8123..8560
DNA (438bp) protein (146aa)
UPF0306 protein RORB6_21590 n=2 Tax=Enterobacteriaceae RepID=M9WC72_RAOOR
hypothetical protein
UPF0306 protein HMPREF9690_04285 {ECO:0000256|HAMAP-Rule:MF_00764}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
L2_059_038G1_scaffold_309_10
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8653..9297
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Raoultella ornithinolytica B6 RepID=M9WBX9_RAOOR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIZ46737.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
L2_059_038G1_scaffold_309_11
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9345..10382
DNA (1038bp) protein (346aa)
UPF0718 protein yraQ n=1 Tax=Klebsiella oxytoca 10-5246 RepID=H3MSX0_KLEOX
UPF0718 protein yraQ {ECO:0000313|EMBL:EHT05266.1}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
hypothetical protein
L2_059_038G1_scaffold_309_12
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10464..11039)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Klebsiella oxytoca 10-5246 RepID=H3MSW9_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:EHT05265.1}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
outer membrane lipoprotein
L2_059_038G1_scaffold_309_13
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11049..11390)
DNA (342bp) protein (114aa)
DnaA initiator-associating protein DiaA n=2 Tax=Enterobacteriaceae RepID=M9W4P1_RAOOR
diaA; DnaA initiator-associating protein DiaA
DnaA initiator-associating protein DiaA {ECO:0000256|HAMAP-Rule:MF_01157, ECO:0000256|SAAS:SAAS00014432}; TaxID=1420013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae 30684/NJST258_2.;"
L2_059_038G1_scaffold_309_14
Raoultella planticola, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11582..11968)
DNA (387bp) protein (129aa)
UPF0102 protein RORB6_21615 n=2 Tax=Enterobacteriaceae RepID=M9WC75_RAOOR
hypothetical protein
UPF0102 protein GRPL_01474 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1005996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella planticola ATCC 33531.;"
L2_059_038G1_scaffold_309_15
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11926..14034)
DNA (2109bp) protein (703aa)
Penicillin-binding protein activator LpoA n=1 Tax=Raoultella ornithinolytica B6 RepID=M9WBY2_RAOOR
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
LppC family lipoprotein
L2_059_038G1_scaffold_309_16
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14098..14958
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Raoultella ornithinolytica B6 RepID=M9W859_RAOOR
hypothetical protein
L2_059_038G1_scaffold_309_17
Raoultella planticola, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14991..16880)
DNA (1890bp) protein (630aa)
Putative exported alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:KFD10188.1}; EC=3.2.1.49 {ECO:0000313|EMBL:KFD10188.1};; TaxID=1005996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella planticola ATCC 33531.;"
Enterotoxin n=1 Tax=Raoultella ornithinolytica B6 RepID=M9W7I0_RAOOR
enterotoxin
L2_059_038G1_scaffold_309_18
Raoultella planticola, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16975..17847)
DNA (873bp) protein (291aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaY {ECO:0000256|HAMAP-Rule:MF_01293}; Short=TBPA {ECO:0000256|HAMAP-Rule:MF_01293};; Short=TagBP aldolase {ECO:0000256|HAMAP-Rule:MF_01293};; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_01293};; D-tagatose-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Ketose 1,6-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_01293}; TaxID=1005996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella planticola ATCC 33531.;"
D-tagatose-1,6-bisphosphate aldolase subunit KbaY n=1 Tax=Raoultella ornithinolytica B6 RepID=M9W4P7_RAOOR
tagatose-bisphosphate aldolase
L2_059_038G1_scaffold_309_19
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17860..19017)
DNA (1158bp) protein (386aa)
Putative tagatose-6-phosphate ketose/aldose isomerase n=1 Tax=Klebsiella oxytoca 10-5246 RepID=H3MSV9_KLEOX
Aldose isomerase {ECO:0000313|EMBL:KIZ46749.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
AgaS family sugar isomerase
L2_059_038G1_scaffold_309_20
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19381..19815)
DNA (435bp) protein (145aa)
PTS system, mannose/fructose/sorbose family, IIA component n=1 Tax=Klebsiella oxytoca 10-5246 RepID=H3MSV8_KLEOX
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:EHT05254.1}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
PTS system fructose subfamily transporter subunit IIA
L2_059_038G1_scaffold_309_21
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19913..21208)
DNA (1296bp) protein (432aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=1 Tax=Klebsiella oxytoca 10-5246 RepID=H3MSV7_KLEOX
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000256|HAMAP-Rule:MF_01295}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
tagatose 6-phosphate aldolase subunit KbaZ
L2_059_038G1_scaffold_309_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21459..22280
DNA (822bp) protein (274aa)
DNA-binding transcriptional regulator AgaR n=2 Tax=Enterobacteriaceae RepID=M9W866_RAOOR
DNA-binding transcriptional regulator AgaR
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:KDV91518.1}; TaxID=1444039 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S1_C1.;"
L2_059_038G1_scaffold_309_23
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22346..23917)
DNA (1572bp) protein (524aa)
Galactarate dehydrogenase {ECO:0000313|EMBL:KIZ46753.1}; EC=4.2.1.42 {ECO:0000313|EMBL:KIZ46753.1};; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
garD; galactarate dehydrogenase (EC:4.2.1.42)
Galactarate dehydrogenase n=1 Tax=Raoultella ornithinolytica B6 RepID=M9W7I8_RAOOR
L2_059_038G1_scaffold_309_24
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24429..25199
DNA (771bp) protein (257aa)
5-keto-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Short=KDGluc aldolase {ECO:0000256|HAMAP-Rule:MF_01291};; Short=KDGlucA {ECO:0000256|HAMAP-Rule:MF_01291};; EC=4.1.2.20 {ECO:0000256|HAMAP-Rule:MF_01291};; 2-dehydro-3-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; 2-keto-3-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; 5-dehydro-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Alpha-keto-beta-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
5-keto-4-deoxy-D-glucarate aldolase n=2 Tax=Enterobacteriaceae RepID=M9W4Q8_RAOOR
alpha-dehydro-beta-deoxy-D-glucarate aldolase
L2_059_038G1_scaffold_309_25
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25228..26118
DNA (891bp) protein (297aa)
Tartronate semialdehyde reductase {ECO:0000313|EMBL:KIZ46755.1}; EC=1.1.1.60 {ECO:0000313|EMBL:KIZ46755.1};; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
2-hydroxy-3-oxopropionate reductase n=2 Tax=Enterobacteriaceae RepID=M9WC88_RAOOR
2-hydroxy-3-oxopropionate reductase
L2_059_038G1_scaffold_309_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26182..27327
DNA (1146bp) protein (382aa)
Glycerate kinase 2 {ECO:0000313|EMBL:KDV91513.1}; EC=2.7.1.31 {ECO:0000313|EMBL:KDV91513.1};; TaxID=1444039 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S1_C1.;"
Glycerate kinase I n=2 Tax=Enterobacteriaceae RepID=M9WBZ8_RAOOR
glycerate kinase I
Displaying 26 items

View Taxonomy