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L2_059_052G1_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 303 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_5_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..792
DNA (792bp) protein (264aa)
Retron-type reverse transcriptase n=2 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJY0_9CLOT
retron-type reverse transcriptase
Retron-type reverse transcriptase {ECO:0000313|EMBL:AGF55131.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_059_052G1_scaffold_5_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1257..1568
DNA (312bp) protein (104aa)
celC.2; PTS system cellobiose-specific transporter subunit IIA (EC:2.7.1.69)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI00036FEF8A
Uncharacterized protein {ECO:0000313|EMBL:EGN41547.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_059_052G1_scaffold_5_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1581..1877
DNA (297bp) protein (99aa)
Beta-glucosides PTS, EIIB (EC:2.7.1.69)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BSI4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN41546.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_059_052G1_scaffold_5_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1894..3207
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI0003775B1B
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
celB.2; PTS system cellobiose-specific transporter subunit IIC
L2_059_052G1_scaffold_5_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3279..4463
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI00037E53EC
Uncharacterized protein {ECO:0000313|EMBL:EGN41544.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_059_052G1_scaffold_5_6
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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4480..5916
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI00036BBA0B
Uncharacterized protein {ECO:0000313|EMBL:EOS29729.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
L2_059_052G1_scaffold_5_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5919..7385
DNA (1467bp) protein (489aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI000371FFA7
Uncharacterized protein {ECO:0000313|EMBL:ETD18051.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_059_052G1_scaffold_5_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7585..8808
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9D1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35667.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ISCpe5, transposase
L2_059_052G1_scaffold_5_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8790..9065
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9D1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36385.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ISCpe5, transposase
L2_059_052G1_scaffold_5_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9249..10097
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI00035F7866
Uncharacterized protein {ECO:0000313|EMBL:EKY23241.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_059_052G1_scaffold_5_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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10094..11695
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI0003809133
Uncharacterized protein {ECO:0000313|EMBL:CDC43686.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
exoenzyme regulatory protein AepA
L2_059_052G1_scaffold_5_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11743..14370
DNA (2628bp) protein (876aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BTE8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN41542.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PTS system transcriptional activator
L2_059_052G1_scaffold_5_13
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14558..14947
DNA (390bp) protein (130aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
purD; phosphoribosylamine--glycine ligase PurD (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Clostridium sp. CAG:221 RepID=R6G0N4_9CLOT
L2_059_052G1_scaffold_5_14
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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15582..17138
DNA (1557bp) protein (519aa)
Predicted protein n=5 Tax=Enterococcus faecalis RepID=C7CWL8_ENTFL
Uncharacterized protein {ECO:0000313|EMBL:EOK52836.1}; TaxID=1151188 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0061.;"
L2_059_052G1_scaffold_5_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17154..17864
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V4Z3_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ55882.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_059_052G1_scaffold_5_16
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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17870..20128
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Bacillus cereus HuB2-9 RepID=J9DFK3_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJV95957.1}; TaxID=1053209 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus HuB2-9.;"
putative RecF/RecN/SMC N domain
L2_059_052G1_scaffold_5_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20863..26478
DNA (5616bp) protein (1872aa)
BNR/Asp-box repeat protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2K6_9FIRM
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EDS74691.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_059_052G1_scaffold_5_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26613..30965
DNA (4353bp) protein (1451aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
polC; DNA polymerase III PolC-type (EC:2.7.7.7)
DNA polymerase III polC-type n=2 Tax=Clostridium butyricum RepID=B1R0V6_CLOBU
L2_059_052G1_scaffold_5_19
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31094..32587
DNA (1494bp) protein (498aa)
Inner membrane transporter yjeM n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W0Y3_CLOBI
yjeM; Inner membrane transporter YjeM
Inner membrane transporter YjeM {ECO:0000313|EMBL:CDM70114.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_059_052G1_scaffold_5_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32710..33192
DNA (483bp) protein (161aa)
Putative lipoprotein n=4 Tax=Clostridium perfringens RepID=H7CWP4_CLOPF
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EIA16795.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_052G1_scaffold_5_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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33382..34758
DNA (1377bp) protein (459aa)
Alginate O-acetyltransferase AlgI family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNS1_9CLOT
Alginate O-acetyltransferase AlgI family protein {ECO:0000313|EMBL:EKY29576.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
alginate biosynthesis protein AlgI
L2_059_052G1_scaffold_5_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34771..35871
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CRA3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKY29575.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_059_052G1_scaffold_5_23
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

36022..36366
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VDM053 RepID=R8P4G2_BACCE
Uncharacterized protein {ECO:0000313|EMBL:GAE36312.1}; TaxID=1236973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus akibai (strain ATCC 43226 / DSM 21942 / JCM 9157 / 1139).;"
hypothetical protein
L2_059_052G1_scaffold_5_24
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36397..37305
DNA (909bp) protein (303aa)
Phospholipase n=1 Tax=Clostridium sp. CAG:221 RepID=R6GM46_9CLOT
Phospholipase {ECO:0000313|EMBL:CDB15242.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
patatin-like phospholipase family protein
L2_059_052G1_scaffold_5_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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37459..37971
DNA (513bp) protein (171aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9STA1_CLOC7
RNA polymerase sigma factor, sigma-70 family protein
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:AIY82615.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_059_052G1_scaffold_5_26
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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37975..39423
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2N4C5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK30357.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
protein of unknown function DUF4179
L2_059_052G1_scaffold_5_27
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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39608..40339
DNA (732bp) protein (244aa)
Transcriptional regulator, ArsR family/dinitrogenase iron-molybdenum cofactor family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRK8_CLOP1
ArsR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ENZ01349.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
L2_059_052G1_scaffold_5_28
unknown

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40518..40766
DNA (249bp) protein (83aa)

This feature has no annotations

L2_059_052G1_scaffold_5_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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40862..41902
DNA (1041bp) protein (347aa)
Methyltransferase domain family n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7E6_CLOBO
Methyltransferase {ECO:0000313|EMBL:KGM98894.1}; TaxID=1443128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. DC5.;"
transcriptional regulator
L2_059_052G1_scaffold_5_30
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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41970..42584
DNA (615bp) protein (205aa)
CHAP domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T7X3_CLOSG
CHAP domain protein {ECO:0000313|EMBL:EDU35937.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;"
chap domain containing protein
Displaying items 1-30 of 303 in total

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