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L2_059_052G1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_50_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

187..1641
DNA (1455bp) protein (485aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0AC18_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29672.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
methyl-accepting chemotaxis protein
L2_059_052G1_scaffold_50_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2069..3118
DNA (1050bp) protein (350aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
carA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=4 Tax=Clostridium butyricum RepID=B1R206_CLOBU
L2_059_052G1_scaffold_50_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3133..6345
DNA (3213bp) protein (1071aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=2 Tax=Clostridium butyricum RepID=M8K148_CLOBU
L2_059_052G1_scaffold_50_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6481..6717
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R204_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52508.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_059_052G1_scaffold_50_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6796..7905)
DNA (1110bp) protein (370aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5I7_CLOBU
HD-GYP hydrolase protein {ECO:0000313|EMBL:ETI91778.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
metal dependent phosphohydrolase
L2_059_052G1_scaffold_50_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8102..10000)
DNA (1899bp) protein (633aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC11_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29667.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
glutamine synthetase
L2_059_052G1_scaffold_50_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10375..11145
DNA (771bp) protein (257aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
murI; glutamate racemase MurI (EC:5.1.1.3)
Glutamate racemase n=2 Tax=Clostridium butyricum RepID=M8JEG6_CLOBU
L2_059_052G1_scaffold_50_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11304..11828
DNA (525bp) protein (175aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rotA; peptidyl-prolyl cis-trans isomerase A (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Clostridium butyricum RepID=B1R200_CLOBU
L2_059_052G1_scaffold_50_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11945..12316
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AAB1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84732.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_059_052G1_scaffold_50_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12318..12986
DNA (669bp) protein (223aa)
Helix-turn-helix domain protein n=2 Tax=Clostridium butyricum RepID=M8J5I2_CLOBU
Putative transcription regulator, lacI/xre family {ECO:0000313|EMBL:KJZ84724.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
helix-turn-helix domain protein
L2_059_052G1_scaffold_50_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12986..14188
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC04_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29662.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_059_052G1_scaffold_50_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14284..17988
DNA (3705bp) protein (1235aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YPX2_CLOBU
Ser-type protease {ECO:0000313|EMBL:KJZ84681.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
subtilisin like protease
L2_059_052G1_scaffold_50_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18055..19380
DNA (1326bp) protein (442aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K137_CLOBU
Spore cortex-lytic enzyme SleC {ECO:0000313|EMBL:KJZ84731.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
subtilisin-like serine protease
L2_059_052G1_scaffold_50_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19462..20400)
DNA (939bp) protein (313aa)
Radical SAM domain protein n=2 Tax=Clostridium butyricum RepID=B1R1Z4_CLOBU
Radical SAM domain protein {ECO:0000313|EMBL:EEP52512.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
radical SAM domain containing protein
L2_059_052G1_scaffold_50_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20516..21577)
DNA (1062bp) protein (354aa)
Transporter n=4 Tax=Clostridium butyricum RepID=B1R1Z3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84653.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_059_052G1_scaffold_50_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21841..22773
DNA (933bp) protein (311aa)
Radical SAM protein, family n=3 Tax=Clostridium butyricum RepID=B1R1Z2_CLOBU
TIGR01212 family radical SAM protein {ECO:0000313|EMBL:ENZ29657.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
radical SAM protein, TIGR01212 family
L2_059_052G1_scaffold_50_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22819..23535
DNA (717bp) protein (239aa)
Probable 2-phosphosulfolactate phosphatase {ECO:0000256|HAMAP-Rule:MF_00490}; EC=3.1.3.71 {ECO:0000256|HAMAP-Rule:MF_00490};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
comB; 2-phosphosulfolactate phosphatase ComB (EC:3.1.3.71)
Probable 2-phosphosulfolactate phosphatase n=3 Tax=Clostridium butyricum RepID=B1R1Z1_CLOBU
L2_059_052G1_scaffold_50_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23568..23990)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YQD5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84657.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative membrane protein
L2_059_052G1_scaffold_50_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24092..24466)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K133_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29654.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_059_052G1_scaffold_50_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24646..24870)
DNA (225bp) protein (75aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1R1Y9_CLOBU
BFD domain protein (2Fe-2S)-binding domain protein {ECO:0000313|EMBL:KJZ84662.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NAD(P)H-nitrite reductase
L2_059_052G1_scaffold_50_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25067..25750
DNA (684bp) protein (228aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Clostridium butyricum RepID=M8J5H2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29652.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
two component transcriptional regulator
L2_059_052G1_scaffold_50_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25899..27038
DNA (1140bp) protein (380aa)
ykoH; sensor histidine kinase YkoH (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFR4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84698.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_059_052G1_scaffold_50_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27189..27878
DNA (690bp) protein (230aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R1Y6_CLOBU
VTC domain superfamily {ECO:0000313|EMBL:EEP52555.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
VTC domain superfamily
L2_059_052G1_scaffold_50_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27980..28669
DNA (690bp) protein (230aa)
Tubulin/FtsZ, GTPase n=3 Tax=Clostridium butyricum RepID=B1R1Y5_CLOBU
Putative membrane protein {ECO:0000313|EMBL:EEP52586.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
twin-arginine translocating C-subunit
L2_059_052G1_scaffold_50_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28869..30821
DNA (1953bp) protein (651aa)
CotH protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K971_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84683.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
CotH protein
L2_059_052G1_scaffold_50_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31762..34875
DNA (3114bp) protein (1038aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ileS; isoleucine--tRNA ligase IleS (EC:6.1.1.5)
Isoleucine--tRNA ligase n=2 Tax=Clostridium butyricum RepID=M8JFQ8_CLOBU
L2_059_052G1_scaffold_50_27

Not on your lists

35100..36098
DNA (999bp) protein (333aa)
Catabolite control protein A n=3 Tax=Clostridium butyricum RepID=B1R1Y1_CLOBU
Catabolite control protein A {ECO:0000313|EMBL:ETJ16572.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
regA; HTH-type transcriptional regulator RegA
L2_059_052G1_scaffold_50_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36258..36707
DNA (450bp) protein (150aa)
Transcriptional regulator, MarR family n=4 Tax=Clostridium butyricum RepID=B1R1Y0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29643.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcriptional regulator, TrmB
L2_059_052G1_scaffold_50_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36707..38086
DNA (1380bp) protein (460aa)
Mate efflux family protein n=2 Tax=Clostridium butyricum RepID=M8K968_CLOBU
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pump {ECO:0000313|EMBL:KJZ84668.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
mate efflux family protein
L2_059_052G1_scaffold_50_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38146..38334)
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1X8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84644.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
Displaying items 1-30 of 94 in total

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