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L2_059_052G1_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_58_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(418..1665)
DNA (1248bp) protein (416aa)
Type II secretion system protein n=3 Tax=Bacteria RepID=J0VRW9_9ENTR
Porin {ECO:0000313|EMBL:KJC05392.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hofQ; porin
L2_059_052G1_scaffold_58_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1971..2297)
DNA (327bp) protein (109aa)
Membrane protein n=3 Tax=Citrobacter RepID=J0M5N4_9ENTR
Type IV pilus biogenesis protein PilO {ECO:0000313|EMBL:CDL41358.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
membrane protein
L2_059_052G1_scaffold_58_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2410..2949)
DNA (540bp) protein (180aa)
Fimbrial assembly family protein n=3 Tax=Citrobacter RepID=J1G330_9ENTR
DNA utilization protein HofN {ECO:0000313|EMBL:KJC08985.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNA utilization protein HofN
L2_059_052G1_scaffold_58_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2949..3728)
DNA (780bp) protein (260aa)
Pilus assembly protein n=2 Tax=Citrobacter RepID=R8UL16_9ENTR
DNA utilization protein HofM {ECO:0000313|EMBL:KJC08984.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNA utilization protein HofM
L2_059_052G1_scaffold_58_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3849..6401
DNA (2553bp) protein (851aa)
Penicillin-binding protein 1a n=3 Tax=Citrobacter RepID=K8QVN6_CITFR
Penicillin-binding protein 1A {ECO:0000313|EMBL:KJC08983.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
mrcA; penicillin-binding protein 1A
L2_059_052G1_scaffold_58_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6457..7017)
DNA (561bp) protein (187aa)
Adp-ribose diphosphatase n=5 Tax=Citrobacter RepID=J0VRX6_9ENTR
Adenosine nucleotide hydrolase {ECO:0000313|EMBL:KJC08982.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
nudE; adenosine nucleotide hydrolase
L2_059_052G1_scaffold_58_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7340..9475
DNA (2136bp) protein (712aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R1FQ13_CITFR
Intracellular growth attenuator protein igaA {ECO:0000313|EMBL:ETX67349.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Intracellular growth attenuator protein igaA
L2_059_052G1_scaffold_58_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9538..10206
DNA (669bp) protein (223aa)
HAD hydrolase, family IA n=8 Tax=Citrobacter RepID=C1MD74_9ENTR
Hydrolase {ECO:0000313|EMBL:ETX67350.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
nucleotidase
L2_059_052G1_scaffold_58_9
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10217..10618
DNA (402bp) protein (134aa)
Heat shock protein 15 n=3 Tax=Citrobacter RepID=K8R0B6_CITFR
ribosome-associated heat shock protein Hsp15
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_059_052G1_scaffold_58_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10643..11521
DNA (879bp) protein (293aa)
33 kDa chaperonin n=7 Tax=Citrobacter RepID=G9SBB3_CITFR
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hslO; Hsp33-like chaperonin
L2_059_052G1_scaffold_58_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11631..13349)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DFH1_CITFR
Membrane protein {ECO:0000313|EMBL:KJC05402.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_059_052G1_scaffold_58_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13728..15350
DNA (1623bp) protein (541aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=9 Tax=Citrobacter RepID=C1MD78_9ENTR
L2_059_052G1_scaffold_58_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15473..15790
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=M3C7P1_CITFR
Toxin HigB-2 {ECO:0000313|EMBL:KJC08976.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_052G1_scaffold_58_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15843..16139
DNA (297bp) protein (99aa)
HTH-type transcriptional regulator yiaG n=3 Tax=Citrobacter RepID=K8R0B4_CITFR
XRE family transcriptional regulator {ECO:0000313|EMBL:KJC08975.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
HTH-type transcriptional regulator yiaG
L2_059_052G1_scaffold_58_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16196..17548)
DNA (1353bp) protein (451aa)
Osmolarity sensor protein n=3 Tax=Citrobacter RepID=K8QVM6_CITFR
Osmolarity sensor protein {ECO:0000313|EMBL:KJC05404.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
envZ; osmolarity sensor protein
L2_059_052G1_scaffold_58_16
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17545..18264)
DNA (720bp) protein (240aa)
Osmolarity response regulator n=7 Tax=Enterobacteriaceae RepID=E8NSQ2_SALET
ompR; two-component response regulator OmpR
Transcriptional regulatory protein ompR {ECO:0000313|EMBL:ESM36801.1}; TaxID=1329845 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae BWH 31.;"
L2_059_052G1_scaffold_58_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18490..18963
DNA (474bp) protein (158aa)
Transcription elongation factor GreB n=9 Tax=Citrobacter RepID=C1MD81_9ENTR
greB; transcription elongation factor GreB
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_059_052G1_scaffold_58_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19062..21395
DNA (2334bp) protein (778aa)
Protein YhgF n=4 Tax=Citrobacter RepID=J0VRY5_9ENTR
Transcription accessory protein {ECO:0000313|EMBL:KJC08971.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcription accessory protein
L2_059_052G1_scaffold_58_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21771..21998
DNA (228bp) protein (76aa)
Ferrous iron transporter A n=12 Tax=Enterobacteriaceae RepID=C1MD83_9ENTR
feoA; ferrous iron transporter A
Ferrous iron transport protein A {ECO:0000313|EMBL:CDL41379.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L2_059_052G1_scaffold_58_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22017..24335
DNA (2319bp) protein (773aa)
Ferrous iron transporter B n=5 Tax=Citrobacter RepID=J1G341_9ENTR
Ferrous iron transport protein B {ECO:0000313|EMBL:KEL80064.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
feoB; ferrous iron transporter B
L2_059_052G1_scaffold_58_21
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24347..24583
DNA (237bp) protein (79aa)
Ferrous iron transport protein C n=11 Tax=Enterobacteriaceae RepID=C1MD85_9ENTR
Ferrous iron transport protein C {ECO:0000256|HAMAP-Rule:MF_01586, ECO:0000256|SAAS:SAAS00010729}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
ferrous iron transporter C
L2_059_052G1_scaffold_58_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24808..25476
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QS78_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL80062.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_059_052G1_scaffold_58_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25522..26292)
DNA (771bp) protein (257aa)
Pimeloyl-[acyl-carrier protein] methyl ester esterase {ECO:0000256|HAMAP-Rule:MF_01260, ECO:0000256|SAAS:SAAS00064125}; EC=3.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01260, ECO:0000256|SAAS:SAAS00064111};; Biotin synthesis protein BioH {ECO:0000256|HAMAP-Rule:MF_01260}; Carboxylesterase BioH {ECO:0000256|HAMAP-Rule:MF_01260}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
carboxylesterase (EC:3.1.1.1)
Pimelyl-[acyl-carrier protein] methyl ester esterase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QU06_CITFR
L2_059_052G1_scaffold_58_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26330..27013
DNA (684bp) protein (228aa)
Gluconate periplasmic binding protein n=4 Tax=Citrobacter RepID=J0M5Q3_9ENTR
DNA utilization protein GntX {ECO:0000313|EMBL:KJC08966.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNA utilization protein GntX
L2_059_052G1_scaffold_58_25
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27072..27647
DNA (576bp) protein (192aa)
Fe/S biogenesis protein NfuA n=10 Tax=Citrobacter RepID=C1MD89_9ENTR
Fe/S biogenesis protein NfuA
Fe/S biogenesis protein NfuA {ECO:0000256|HAMAP-Rule:MF_01637, ECO:0000256|SAAS:SAAS00035357}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L2_059_052G1_scaffold_58_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28016..29332
DNA (1317bp) protein (439aa)
High-affinity gluconate transporter n=12 Tax=Enterobacteriaceae RepID=C1MD90_9ENTR
High-affinity gluconate transporter {ECO:0000313|EMBL:ETX67366.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
gluconate transporter
L2_059_052G1_scaffold_58_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29377..31464)
DNA (2088bp) protein (696aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
malQ; 4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QS73_CITFR
L2_059_052G1_scaffold_58_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31474..33867)
DNA (2394bp) protein (798aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Phosphorylase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QU03_CITFR
maltose phosphorylase
L2_059_052G1_scaffold_58_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34486..37191
DNA (2706bp) protein (902aa)
HTH-type transcriptional regulator MalT n=2 Tax=Citrobacter RepID=M3B8T0_CITFR
HTH-type transcriptional regulator MalT {ECO:0000256|HAMAP-Rule:MF_01247, ECO:0000256|SAAS:SAAS00010382}; ATP-dependent transcriptional activator MalT {ECO:0000256|HAMAP-Rule:MF_01247}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator MalT
L2_059_052G1_scaffold_58_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37233..37991)
DNA (759bp) protein (253aa)
Glycerol-3-phosphate regulon repressor n=10 Tax=Enterobacteriaceae RepID=C1MD94_9ENTR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHY10850.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Displaying items 1-30 of 97 in total

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