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L2_059_052G1_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_88_1
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..480
DNA (480bp) protein (160aa)
Collagen adhesion protein n=1 Tax=Bacillus cereus BAG3O-1 RepID=R8VEE4_BACCE
Collagen adhesion protein {ECO:0000313|EMBL:EOQ30601.1}; TaxID=1085388 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG3O-1.;"
collagen adhesion protein
L2_059_052G1_scaffold_88_2
unknown

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786..971
DNA (186bp) protein (62aa)

This feature has no annotations

L2_059_052G1_scaffold_88_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1192..2856
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U2P1_9CLOT
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AJH01172.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
beta-lactamase domain-containing protein
L2_059_052G1_scaffold_88_4
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2945..3487
DNA (543bp) protein (181aa)
Membrane-associated phospholipid phosphatase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TWR5_9CLOT
PAP2 family protein
PAP2 family protein {ECO:0000313|EMBL:CDM67599.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_059_052G1_scaffold_88_5
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3592..8142
DNA (4551bp) protein (1517aa)
Glutamate synthase domain 2 n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NPX7_9FIRM
Glutamate synthase domain 2 {ECO:0000313|EMBL:CCZ04174.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
glutamate synthase (ferredoxin)
L2_059_052G1_scaffold_88_6
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8123..9640
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HMN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29434.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
glutamate synthase, small subunit
L2_059_052G1_scaffold_88_7
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9837..10352
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24UH7_DESHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDX02621.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
L2_059_052G1_scaffold_88_8
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10409..11311
DNA (903bp) protein (301aa)
Chemotaxis protein CheV n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LYT8_9CLOT
cheV; chemotaxis protein CheV
Chemotaxis protein CheV {ECO:0000313|EMBL:AGF58460.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_059_052G1_scaffold_88_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11434..11766
DNA (333bp) protein (111aa)
SdpI/YhfL protein family n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUN8_CLOSA
SdpI/YhfL protein family
SdpI/YhfL protein family {ECO:0000313|EMBL:AGX44310.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_059_052G1_scaffold_88_10
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11870..12664)
DNA (795bp) protein (265aa)
Cof-like hydrolase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBY8_9CLOT
HAD-superfamily hydrolase
HAD-superfamily hydrolase {ECO:0000313|EMBL:CDM68225.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_059_052G1_scaffold_88_11
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12785..13285
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N3Y2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB89569.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L2_059_052G1_scaffold_88_12
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13287..13874
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002D7242F
Uncharacterized protein {ECO:0000313|EMBL:EQB89568.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L2_059_052G1_scaffold_88_13
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13883..14677
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PPB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB89567.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L2_059_052G1_scaffold_88_14
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14860..15528
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFD3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68973.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_059_052G1_scaffold_88_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15525..16541
DNA (1017bp) protein (339aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH30_9CLOT
sensor histidine kinase
L2_059_052G1_scaffold_88_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16632..17399
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H814_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98544.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter ATP-binding protein
L2_059_052G1_scaffold_88_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17389..19374
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3I7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98543.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative membrane protein
L2_059_052G1_scaffold_88_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19471..19992
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QH98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY27384.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Hypothetical protein
L2_059_052G1_scaffold_88_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20068..20826
DNA (759bp) protein (253aa)
MerR family transcriptional regulator n=1 Tax=Clostridium botulinum RepID=UPI0003044CAC
MerR family transcriptional regulator
MerR-family transcriptional regulator {ECO:0000313|EMBL:CDH90767.1}; Transcriptional activator TipA {ECO:0000313|EMBL:ACD22527.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_059_052G1_scaffold_88_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20990..21499)
DNA (510bp) protein (170aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH66_9CLOT
ferritin
L2_059_052G1_scaffold_88_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21645..22010
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EXZ3_CLOTA
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22631.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.;"
hypothetical protein
L2_059_052G1_scaffold_88_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22137..23297
DNA (1161bp) protein (387aa)
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Alanine racemase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LXY6_9CLOT
L2_059_052G1_scaffold_88_23
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23470..23838
DNA (369bp) protein (123aa)
GntR-family transcriptional regulator n=3 Tax=Clostridium butyricum RepID=B1QZS2_CLOBU
Transcriptional regulator, GntR family {ECO:0000313|EMBL:KJZ86520.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
yhcF; HTH-type transcriptional regulator YhcF
L2_059_052G1_scaffold_88_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23839..24540
DNA (702bp) protein (234aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQM1_CLOBO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES49997.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
ABC transporter ATP-binding protein
L2_059_052G1_scaffold_88_25
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24534..25325
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4J9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ01574.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
ABC transporter permease
L2_059_052G1_scaffold_88_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25457..25981
DNA (525bp) protein (175aa)
PAP2 family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN77_9CLOT
PAP2 family protein {ECO:0000313|EMBL:EKY29454.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
membrane-associated phospholipid phosphatase
L2_059_052G1_scaffold_88_27
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25989..26945
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PFW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86627.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L2_059_052G1_scaffold_88_28
unknown

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comp(26993..27727)
DNA (735bp) protein (245aa)

This feature has no annotations

L2_059_052G1_scaffold_88_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27853..28239
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BDL9_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EDS76415.1}; TaxID=445337 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C str. Eklund.;"
hypothetical protein
L2_059_052G1_scaffold_88_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28319..29719)
DNA (1401bp) protein (467aa)
MATE efflux family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDN0_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EKY25780.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
MATE efflux family protein
Displaying items 1-30 of 95 in total

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