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L2_059_052G1_scaffold_109

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Displaying items 31-60 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_109_31
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30903..31352)
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=957 Tax=Enterobacteriaceae RepID=NRDR_ECO24
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1401327 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae WRSd3.;"
L2_059_052G1_scaffold_109_32
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31503..32042
DNA (540bp) protein (180aa)
Uncharacterized lipoprotein yajI n=33 Tax=Escherichia coli RepID=E2QGF6_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ45778.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L2_059_052G1_scaffold_109_33
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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32341..33225
DNA (885bp) protein (295aa)
Nucleoside-specific channel-forming protein tsx n=340 Tax=Escherichia RepID=E2QGF5_ECOLX
tsx; nucleoside-specific channel-forming protein Tsx
Nucleoside-specific channel-forming protein tsx {ECO:0000313|EMBL:ELJ76144.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_059_052G1_scaffold_109_34
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(33263..33610)
DNA (348bp) protein (116aa)
Uncharacterized protein YajD n=1304 Tax=Enterobacteriaceae RepID=YAJD_ECO57
hypothetical protein
HNH endonuclease family protein {ECO:0000313|EMBL:KDY62336.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L2_059_052G1_scaffold_109_35
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(33740..34711)
DNA (972bp) protein (324aa)
Protein translocase subunit SecF n=1280 Tax=Enterobacteriaceae RepID=SECF_ECO57
secF; preprotein translocase subunit SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
L2_059_052G1_scaffold_109_36
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(34722..36536)
DNA (1815bp) protein (605aa)
Protein translocase subunit SecD n=359 Tax=Escherichia RepID=E2QGF2_ECOLX
secD; hypothetical protein
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_059_052G1_scaffold_109_37
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(36597..36929)
DNA (333bp) protein (111aa)
UPF0092 membrane protein YajC n=1434 Tax=Enterobacteriaceae RepID=YAJC_ECO57
yajC; preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EZK26215.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
L2_059_052G1_scaffold_109_38
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36952..38079)
DNA (1128bp) protein (376aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
Queuine tRNA-ribosyltransferase n=1342 Tax=Enterobacteriaceae RepID=TGT_ECO24
L2_059_052G1_scaffold_109_39
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38134..39204)
DNA (1071bp) protein (357aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=3 Tax=Escherichia coli RepID=E2QGE9_ECOLX
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase
L2_059_052G1_scaffold_109_40
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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39297..39878
DNA (582bp) protein (194aa)
Acyl carrier protein phosphodiesterase {ECO:0000255|HAMAP-Rule:MF_01950}; Short=ACP phosphodiesterase {ECO:0000255|HAMAP-Rule:MF_01950};; EC=3.1.4.14 {ECO:0000255|HAMAP-Rule:MF_01950};; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Acyl carrier protein phosphodiesterase n=123 Tax=Escherichia coli RepID=ACPH_ECOL6
yajB; acyl carrier protein phosphodiesterase
L2_059_052G1_scaffold_109_41
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39883..41700)
DNA (1818bp) protein (606aa)
Maltodextrin glucosidase {ECO:0000313|EMBL:CAR06636.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CAR06636.1};; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
Maltodextrin glucosidase n=1 Tax=Escherichia coli HVH 9 (4-6942539) RepID=T5PXS6_ECOLX
malZ; Maltodextrin glucosidase
L2_059_052G1_scaffold_109_42
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(41856..43229)
DNA (1374bp) protein (458aa)
Proline-specific permease ProY n=875 Tax=Enterobacteriaceae RepID=PROY_ECO57
amino acid permease
Proline-specific permease {ECO:0000313|EMBL:CBG33267.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
L2_059_052G1_scaffold_109_43
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43305..44624)
DNA (1320bp) protein (440aa)
Branched-chain amino acid transport system II carrier n=395 Tax=Escherichia RepID=E2QGE5_ECOLX
brnQ; branched chain amino acid transporter (LIV-II)
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:ACB15987.1}; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
L2_059_052G1_scaffold_109_44
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45031..46326)
DNA (1296bp) protein (432aa)
phoR; phosphate regulon sensor protein (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
Phosphate regulon sensor protein phoR n=421 Tax=Enterobacteriaceae RepID=E2QGE4_ECOLX
L2_059_052G1_scaffold_109_45
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46384..47073)
DNA (690bp) protein (230aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1320 Tax=Enterobacteriaceae RepID=PHOB_ECO57
winged helix family two component transcriptional regulator PhoB
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:EFK21982.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L2_059_052G1_scaffold_109_46
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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47263..48465
DNA (1203bp) protein (401aa)
Nuclease sbcCD subunit D n=32 Tax=Escherichia coli RepID=E2QGE2_ECOLX
exonuclease subunit SbcD
Exonuclease subunit SbcD {ECO:0000313|EMBL:CDC80352.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_059_052G1_scaffold_109_47
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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48462..51605
DNA (3144bp) protein (1048aa)
Exonuclease sbcC n=3 Tax=Escherichia coli RepID=E2QGE1_ECOLX
exonuclease subunit SbcC
Nuclease sbcCD, subunit C {ECO:0000313|EMBL:ESD33502.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_059_052G1_scaffold_109_48
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51647..52915
DNA (1269bp) protein (423aa)
Protein AraJ n=4 Tax=Escherichia coli RepID=E7U1W5_ECOLX
MFS transport protein AraJ
AraJ MFS transporter {ECO:0000313|EMBL:ABE05917.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_059_052G1_scaffold_109_49
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53184..54092)
DNA (909bp) protein (303aa)
fructokinase (EC:2.7.1.4)
Manno(Fructo)kinase n=6 Tax=Escherichia coli RepID=E2QGD9_ECOLX
Fructokinase {ECO:0000313|EMBL:ESD33498.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_059_052G1_scaffold_109_50
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54151..55128
DNA (978bp) protein (326aa)
Recombination associated protein n=22 Tax=Escherichia coli RepID=I2YTB5_ECOLX
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
rdgC; Recombination-associated protein rdgC
L2_059_052G1_scaffold_109_51
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55489..55668
DNA (180bp) protein (60aa)
Uncharacterized protein n=57 Tax=Escherichia coli RepID=E0QWJ5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EZJ45757.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
hypothetical protein
L2_059_052G1_scaffold_109_52
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55772..56056)
DNA (285bp) protein (95aa)
UPF0345 protein YaiE n=1379 Tax=Enterobacteriaceae RepID=YAIE_ECO24
hypothetical protein
UPF0345 protein YaiE {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L2_059_052G1_scaffold_109_53
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56128..56805)
DNA (678bp) protein (226aa)
Protein aroM n=21 Tax=Escherichia coli RepID=E2QGD5_ECOLX
aroM; Protein aroM
Protein AroM {ECO:0000313|EMBL:EGI17849.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L2_059_052G1_scaffold_109_54
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57063..57254)
DNA (192bp) protein (64aa)
Uncharacterized protein YaiA n=1166 Tax=Enterobacteriaceae RepID=YAIA_ECO57
yaiA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZD89589.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L2_059_052G1_scaffold_109_55
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57304..57828)
DNA (525bp) protein (175aa)
aroL; shikimate kinase II (EC:2.7.1.71)
Shikimate kinase 2 {ECO:0000256|HAMAP-Rule:MF_01269, ECO:0000256|SAAS:SAAS00003442}; Short=SK 2 {ECO:0000256|HAMAP-Rule:MF_01269};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_01269, ECO:0000256|SAAS:SAAS00003395};; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
Shikimate kinase 2 n=1193 Tax=Enterobacteriaceae RepID=AROL_ECO24
L2_059_052G1_scaffold_109_56
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58011..58469)
DNA (459bp) protein (153aa)
UPF0178 protein YaiI n=7 Tax=Escherichia coli RepID=H5KR33_ECOLX
yaiI; hypothetical protein
UPF0178 protein YaiI {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
L2_059_052G1_scaffold_109_57
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58589..59398
DNA (810bp) protein (270aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
Pyrroline-5-carboxylate reductase n=112 Tax=Escherichia coli RepID=E2QGD1_ECOLX
proC; Pyrroline-5-carboxylate reductase
L2_059_052G1_scaffold_109_58
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59415..60530)
DNA (1116bp) protein (372aa)
Uncharacterized protein yaiC n=155 Tax=Escherichia RepID=E2QGD0_ECOLX
adrA; diguanylate cyclase AdrA
Putative diguanylate cyclase AdrA {ECO:0000313|EMBL:EZJ54402.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_059_052G1_scaffold_109_59
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60632..60952)
DNA (321bp) protein (107aa)
Phosphate starvation-inducible protein PsiF n=1242 Tax=Enterobacteriaceae RepID=PSIF_ECOL6
PsiF repeat protein
PsiF repeat protein {ECO:0000313|EMBL:ESA82020.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L2_059_052G1_scaffold_109_60
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61071..62486)
DNA (1416bp) protein (472aa)
phoA; alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase H {ECO:0000313|EMBL:EHU48184.1}; EC=3.1.3.1 {ECO:0000313|EMBL:EHU48184.1};; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
Alkaline phosphatase n=122 Tax=Escherichia coli RepID=E2QGC8_ECOLX
Displaying items 31-60 of 84 in total

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