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L2_059_052G1_scaffold_134

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Displaying items 61-90 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_134_61
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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62158..62709
DNA (552bp) protein (184aa)
Response regulator protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DTC6_CITFR
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJC12019.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
LuxR family transcriptional regulator
L2_059_052G1_scaffold_134_62
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62787..64046)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8UVB9_9ENTR
MFS transporter {ECO:0000313|EMBL:KJC12018.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
symporter
L2_059_052G1_scaffold_134_63
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(64112..65059)
DNA (948bp) protein (316aa)
Fructokinase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWV6_CITFR
Fructokinase {ECO:0000313|EMBL:KJC10200.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fructokinase
L2_059_052G1_scaffold_134_64
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65090..66526)
DNA (1437bp) protein (479aa)
Glycoside hydrolase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QJS2_CITFR
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:KJC12016.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
glycosyl hydrolase family 32
L2_059_052G1_scaffold_134_65
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66701..67696
DNA (996bp) protein (332aa)
LacI transcriptional regulator n=6 Tax=Citrobacter RepID=J0LXS3_9ENTR
LacI family transcriptional regulator {ECO:0000313|EMBL:ETX71192.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
sucrose specific transcriptional regulator CscR
L2_059_052G1_scaffold_134_66
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67897..68991)
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=8 Tax=Enterobacteriaceae RepID=G9SK48_CITFR
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
ychF; GTP-binding protein
L2_059_052G1_scaffold_134_67
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69107..69691)
DNA (585bp) protein (195aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Peptidyl-tRNA hydrolase n=7 Tax=Enterobacteriaceae RepID=G9SK47_CITFR
peptidyl-tRNA hydrolase
L2_059_052G1_scaffold_134_68
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69966..70247
DNA (282bp) protein (94aa)
Membrane protein n=6 Tax=Citrobacter RepID=J0M440_9ENTR
Inner membrane protein {ECO:0000313|EMBL:ETX71185.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_052G1_scaffold_134_69
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70362..71723)
DNA (1362bp) protein (454aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QJR8_CITFR
L2_059_052G1_scaffold_134_70
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72335..73717
DNA (1383bp) protein (461aa)
Diaminobutyrate--2-oxoglutarate aminotransferase {ECO:0000313|EMBL:KEL81659.1}; EC=2.6.1.76 {ECO:0000313|EMBL:KEL81659.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
diaminobutyrate--2-oxoglutarate aminotransferase (EC:2.6.1.76)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UR48_9ENTR
L2_059_052G1_scaffold_134_71
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73733..75196
DNA (1464bp) protein (488aa)
8-amino-7-oxononanoate synthase n=3 Tax=Citrobacter RepID=J0LXR2_9ENTR
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:ETX71182.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
2,4-diaminobutyrate decarboxylase
L2_059_052G1_scaffold_134_72
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75317..76972)
DNA (1656bp) protein (552aa)
Transporter n=6 Tax=Citrobacter RepID=K8QNQ0_CITFR
Sulfate permease {ECO:0000313|EMBL:ETX71181.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transporter
L2_059_052G1_scaffold_134_73
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77124..77855)
DNA (732bp) protein (244aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1192590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Enteritidis str.; 2010K-0267.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9Z8S7_9ENTR
L2_059_052G1_scaffold_134_74
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78168..79019)
DNA (852bp) protein (284aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Citrobacter freundii RepID=K8QJR4_CITFR
kinase
L2_059_052G1_scaffold_134_75
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79016..79639)
DNA (624bp) protein (208aa)
Outer-membrane lipoprotein LolB n=2 Tax=Citrobacter freundii RepID=K8QM87_CITFR
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
lolB; outer membrane lipoprotein LolB
L2_059_052G1_scaffold_134_76
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79851..81107
DNA (1257bp) protein (419aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=6 Tax=Citrobacter RepID=J0LXQ7_9ENTR
L2_059_052G1_scaffold_134_77
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81149..82231
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=6 Tax=Citrobacter RepID=J1G1Q3_9ENTR
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
prfA; peptide chain release factor 1
L2_059_052G1_scaffold_134_78
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82231..83064
DNA (834bp) protein (278aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
SAM-dependent methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase n=2 Tax=Citrobacter freundii RepID=K8QWU2_CITFR
L2_059_052G1_scaffold_134_79
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83061..83453
DNA (393bp) protein (131aa)
Protein sirB2 n=4 Tax=Citrobacter RepID=J0VQD5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC10892.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_052G1_scaffold_134_80
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83456..84265
DNA (810bp) protein (270aa)
Protein sirB1 n=9 Tax=Citrobacter RepID=G9SK34_CITFR
Protein sirB1 {ECO:0000313|EMBL:ETX63264.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L2_059_052G1_scaffold_134_81
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84301..85155
DNA (855bp) protein (285aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=7 Tax=Enterobacteriaceae RepID=I6H5K1_SHIFL
L2_059_052G1_scaffold_134_82
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85254..86354)
DNA (1101bp) protein (367aa)
Calcium/sodium:proton antiporter n=5 Tax=Citrobacter RepID=J1G1P7_9ENTR
Calcium/sodium:proton antiporter {ECO:0000313|EMBL:KJC11999.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
calcium/sodium:proton antiporter
L2_059_052G1_scaffold_134_83
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86758..87453
DNA (696bp) protein (232aa)
Cation transporter ChaC n=5 Tax=Citrobacter RepID=J0M426_9ENTR
Cation transporter ChaC {ECO:0000313|EMBL:ETX71170.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transporter
L2_059_052G1_scaffold_134_84
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87508..87753)
DNA (246bp) protein (82aa)
Uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=I6H5K4_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:CDL41884.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L2_059_052G1_scaffold_134_85
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88016..88369)
DNA (354bp) protein (118aa)
Protein ychN n=5 Tax=Citrobacter RepID=J1G1V2_9ENTR
Protein ychN {ECO:0000313|EMBL:ETX71168.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_052G1_scaffold_134_86
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88545..89930
DNA (1386bp) protein (462aa)
Protein ychn n=3 Tax=Citrobacter RepID=K8ZND2_9ENTR
Invasin {ECO:0000313|EMBL:KJC10905.2}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
invasin
L2_059_052G1_scaffold_134_87
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89952..90602)
DNA (651bp) protein (217aa)
Nitrate/nitrite response regulator protein NarL n=9 Tax=Citrobacter RepID=D4B8R6_9ENTR
Nitrate/nitrite response regulator protein narL {ECO:0000313|EMBL:KDF17896.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
transcriptional regulator NarL
L2_059_052G1_scaffold_134_88
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90595..92391)
DNA (1797bp) protein (599aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Sensory histidine kinase in two component regulatory system with NarL n=4 Tax=Citrobacter RepID=J0M422_9ENTR
nitrate/nitrite sensor protein NarX
L2_059_052G1_scaffold_134_89
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92732..94123
DNA (1392bp) protein (464aa)
Nitrite extrusion protein 1 n=5 Tax=Citrobacter RepID=J0VQC5_9ENTR
Nitrite extrusion protein 1 {ECO:0000313|EMBL:KEL81678.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
nitrate/nitrite transporter NarK
L2_059_052G1_scaffold_134_90
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94638..98381
DNA (3744bp) protein (1248aa)
Nitrate reductase A subunit alpha n=2 Tax=root RepID=K8QM77_CITFR
Respiratory nitrate reductase 1 alpha chain {ECO:0000313|EMBL:ETX71163.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Respiratory nitrate reductase alpha chain
Displaying items 61-90 of 102 in total

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