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L2_059_052G1_scaffold_137

Search features with annotation key words

Displaying items 31-60 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_137_31
unknown

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comp(30593..31576)
DNA (984bp) protein (328aa)

This feature has no annotations

L2_059_052G1_scaffold_137_32
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31676..32098)
DNA (423bp) protein (141aa)
Cytochrome b5-like Heme/Steroid binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q7L2_9CLOT
cytochrome b5-like Heme/Steroid binding domain protein
Cytochrome b5-like Heme/Steroid binding domain protein {ECO:0000313|EMBL:AIY83311.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_059_052G1_scaffold_137_33
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32489..33883
DNA (1395bp) protein (465aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
asnS; asparagine--tRNA ligase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FR84_9CLOT
L2_059_052G1_scaffold_137_34
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33928..34590)
DNA (663bp) protein (221aa)
Response regulator receiver domain protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAZ5_FUSMR
tetratricopeptide repeat family protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:AIY84713.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_059_052G1_scaffold_137_35
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34568..36433)
DNA (1866bp) protein (622aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A4S7_NATTJ
Uncharacterized protein {ECO:0000313|EMBL:KJU70671.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
sensory box protein
L2_059_052G1_scaffold_137_36
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36454..37146)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96601.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
kdpE; DNA-binding response regulator KdpE
L2_059_052G1_scaffold_137_37
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37115..39832)
DNA (2718bp) protein (906aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
kdpD; sensor histidine kinase KdpD (EC:2.7.3.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6D7_9CLOT
L2_059_052G1_scaffold_137_38
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39848..40441)
DNA (594bp) protein (198aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
kdpC; potassium-transporting ATPase subunit C (EC:3.6.3.12)
K+-transporting ATPase, C subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R6_9CLOT
L2_059_052G1_scaffold_137_39
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(40454..42517)
DNA (2064bp) protein (688aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
kdpB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2B3_9CLOT
L2_059_052G1_scaffold_137_40
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42534..44270)
DNA (1737bp) protein (579aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC28_9CLOT
L2_059_052G1_scaffold_137_41
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44565..45098)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XL08_9CLOT
carbohydrate binding domain protein
Carbohydrate binding domain protein {ECO:0000313|EMBL:AIY83774.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_059_052G1_scaffold_137_42
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(45133..45639)
DNA (507bp) protein (169aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUQ1_CLOBO
L2_059_052G1_scaffold_137_43
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(45705..47006)
DNA (1302bp) protein (434aa)
Putative ATPase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LVA4_9CLOT
putative ATPase
Putative ATPase {ECO:0000313|EMBL:AGF57055.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_059_052G1_scaffold_137_44
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(47099..48337)
DNA (1239bp) protein (413aa)
sudA: sulfide dehydrogenase subunit alpha (EC:1.8.-.- 1.18.1.2)
Oxidoreductase n=2 Tax=Clostridium butyricum RepID=B1QZT7_CLOBU
Oxidoreductase {ECO:0000313|EMBL:EEP53992.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_059_052G1_scaffold_137_45
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(48749..50671)
DNA (1923bp) protein (641aa)
Aconitate hydratase, putative, Aquifex type n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TTW8_9CLOT
Aconitate hydratase, putative, Aquifex type {ECO:0000313|EMBL:EKQ56005.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
aconitate hydratase
L2_059_052G1_scaffold_137_46
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50701..51864)
DNA (1164bp) protein (388aa)
leuA2; 2-isopropylmalate synthase 2 (EC:2.3.3.13)
Homocitrate synthase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIE0_9CLOT
Trans-homoaconitate synthase {ECO:0000313|EMBL:KJU71949.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_059_052G1_scaffold_137_47
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(52205..54316)
DNA (2112bp) protein (704aa)
nrdD; anaerobic ribonucleoside-triphosphate reductase NrdD (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase NrdD {ECO:0000313|EMBL:AGX41159.1}; EC=1.17.4.2 {ECO:0000313|EMBL:AGX41159.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Anaerobic ribonucleoside-triphosphate reductase NrdD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MK16_CLOSA
L2_059_052G1_scaffold_137_48
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54540..55529
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FPV7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82682.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_059_052G1_scaffold_137_49
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(55562..56602)
DNA (1041bp) protein (347aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EKE9_9FIRM
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI95147.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
diguanylate cyclase
L2_059_052G1_scaffold_137_50
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56788..57633
DNA (846bp) protein (282aa)
EDD domain protein, DegV family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIZ0_9CLOT
EDD, DegV family domain protein
EDD, DegV family domain protein {ECO:0000313|EMBL:AIY83087.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_059_052G1_scaffold_137_51
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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57638..58090
DNA (453bp) protein (151aa)
Putative Transcriptional regulator, PadR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENP8_9CLOT
Putative Transcriptional regulator, PadR family {ECO:0000313|EMBL:CDG02802.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
PadR family transcriptional regulator
L2_059_052G1_scaffold_137_52
unknown

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58154..58351
DNA (198bp) protein (66aa)

This feature has no annotations

L2_059_052G1_scaffold_137_53
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(58530..58721)
DNA (192bp) protein (64aa)
Ferredoxin n=212 Tax=Clostridium difficile RepID=T3H5X5_CLODC
hypothetical protein
Ferredoxin {ECO:0000313|EMBL:EQI00012.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_059_052G1_scaffold_137_54
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58791..59627)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XXQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00392.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
cobQ/CobB/MinD/ParA nucleotide binding domain protein
L2_059_052G1_scaffold_137_55
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59653..60486)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U530_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83865.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_059_052G1_scaffold_137_56
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(60473..61243)
DNA (771bp) protein (257aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
lgt2; prolipoprotein diacylglyceryl transferase 2 (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=3 Tax=Clostridium butyricum RepID=B1R1W5_CLOBU
L2_059_052G1_scaffold_137_57
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61341..61889)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNY8_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41152.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_059_052G1_scaffold_137_58
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61925..63232)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2THX6_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:KJU71939.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L2_059_052G1_scaffold_137_59
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(63351..64031)
DNA (681bp) protein (227aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U3X8_9CLOT
ksgA; dimethyladenosine transferase
L2_059_052G1_scaffold_137_60
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64003..64149)
DNA (147bp) protein (49aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Ribosomal RNA small subunit methyltransferase A n=4 Tax=Clostridium butyricum RepID=B1R1W8_CLOBU
ksgA; dimethyladenosine transferase
Displaying items 31-60 of 149 in total

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