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L2_059_052G1_scaffold_137

Search features with annotation key words

Displaying items 1-30 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_137_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(370..777)
DNA (408bp) protein (136aa)
RNA-binding S1 domain-containing protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M7L2_9CLOT
RNA-binding S1 domain-containing protein
RNA-binding S1 domain-containing protein {ECO:0000313|EMBL:AGF53954.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_059_052G1_scaffold_137_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(838..1131)
DNA (294bp) protein (98aa)
Putative cell division protein FtsL n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQ76_CLOPS
septum formation initiator family protein
Septum formation initiator family protein {ECO:0000313|EMBL:AIY84161.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_059_052G1_scaffold_137_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1207..1599)
DNA (393bp) protein (131aa)
Spore cortex biosynthesis protein YabQ n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CHG4_9CLOT
Spore cortex biosynthesis protein YabQ {ECO:0000313|EMBL:EOR26646.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
yabQ; spore cortex biosynthesis protein YabQ
L2_059_052G1_scaffold_137_4
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1605..1877)
DNA (273bp) protein (91aa)
Sporulation protein YabP n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAV6_9CLOT
YabP family protein
YabP family protein {ECO:0000313|EMBL:ABR32283.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_059_052G1_scaffold_137_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1942..2202)
DNA (261bp) protein (87aa)
S4 domain protein n=2 Tax=Clostridium botulinum E RepID=B2UXT6_CLOBA
S4 domain-containing protein
S4 domain protein {ECO:0000313|EMBL:AIY81751.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_059_052G1_scaffold_137_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2259..2534)
DNA (276bp) protein (92aa)
DNA-binding protein HU n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M7K6_9CLOT
hup; DNA-binding protein HU
DNA-binding protein {ECO:0000313|EMBL:KJU71980.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_059_052G1_scaffold_137_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2752..4203)
DNA (1452bp) protein (484aa)
Putative MazG family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENS9_9CLOT
Putative MazG family protein {ECO:0000313|EMBL:CDG02832.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
MazG family protein
L2_059_052G1_scaffold_137_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4229..5767)
DNA (1539bp) protein (513aa)
Stage V sporulation protein B n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKQ2_CLOSA
spoVB1; stage V sporulation protein B
Stage V sporulation protein B {ECO:0000313|EMBL:AGX41190.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_059_052G1_scaffold_137_9
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5869..6426)
DNA (558bp) protein (186aa)
Stage V sporulation protein T n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EJQ4_9FIRM
Stage V sporulation protein T {ECO:0000313|EMBL:ERI93116.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
spoVT; stage V sporulation protein T
L2_059_052G1_scaffold_137_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6566..7552)
DNA (987bp) protein (329aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Peptidylprolyl isomerase n=1 Tax=Clostridium intestinale URNW RepID=U2NGP9_9CLOT
PPIC-type PPIASE domain protein
L2_059_052G1_scaffold_137_11
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7675..11193)
DNA (3519bp) protein (1173aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
Transcription-repair coupling factor n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FPJ5_CLOPA
transcription-repair coupling factor
L2_059_052G1_scaffold_137_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11196..11771)
DNA (576bp) protein (192aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Clostridium colicanis 209318 RepID=N9XWQ7_9CLOT
L2_059_052G1_scaffold_137_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11940..13058)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WBV7_9CLOT
PDZ domain protein
PDZ domain protein {ECO:0000313|EMBL:AIY84876.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_059_052G1_scaffold_137_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13075..14490)
DNA (1416bp) protein (472aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WBG6_9CLOT
HAMP domain protein
L2_059_052G1_scaffold_137_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14491..15177)
DNA (687bp) protein (229aa)
Two-component system response regulator n=1 Tax=Clostridium colicanis 209318 RepID=N9XXM1_9CLOT
response regulator
Response regulator {ECO:0000313|EMBL:AIY84099.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_059_052G1_scaffold_137_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15368..16327)
DNA (960bp) protein (320aa)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583, ECO:0000313|EMBL:AIY82642.1}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583, ECO:0000313|EMBL:AIY82642.1};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Clostridium colicanis 209318 RepID=N9WBH3_9CLOT
L2_059_052G1_scaffold_137_17
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16382..17749)
DNA (1368bp) protein (456aa)
glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase (EC:2.7.7.23)
Bifunctional protein GlmU n=1 Tax=Clostridium colicanis 209318 RepID=N9XXN1_9CLOT
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
L2_059_052G1_scaffold_137_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18120..18407)
DNA (288bp) protein (96aa)
Putative septation protein SpoVG n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EGA8_CLOPA
spoVG; putative septation protein SpoVG
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_059_052G1_scaffold_137_19
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18534..19349)
DNA (816bp) protein (272aa)
Purine operon repressor, PurR n=2 Tax=Clostridium RepID=A6LPI9_CLOB8
pur operon repressor
Pur operon repressor {ECO:0000313|EMBL:AJG96792.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L2_059_052G1_scaffold_137_20
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19554..20930
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
murC; UDP-N-acetylmuramate--alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridium colicanis 209318 RepID=N9XWS1_9CLOT
L2_059_052G1_scaffold_137_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21137..21955
DNA (819bp) protein (273aa)
punA; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Purine nucleoside phosphorylase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQ56_CLOPS
L2_059_052G1_scaffold_137_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22005..23225
DNA (1221bp) protein (407aa)
NupC family nucleoside transporter n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIF5_9CLOT
nucleoside transporter, NupC family protein
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_059_052G1_scaffold_137_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23379..24122)
DNA (744bp) protein (248aa)
Putative membrane protein n=2 Tax=Clostridium botulinum F RepID=A7GCP6_CLOBL
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABS41804.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
L2_059_052G1_scaffold_137_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24123..24995)
DNA (873bp) protein (291aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium botulinum Bf RepID=B1QKT6_CLOBO
ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EEH99333.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_059_052G1_scaffold_137_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24988..25377)
DNA (390bp) protein (130aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium botulinum F RepID=A7GCP4_CLOBL
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABS42586.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
L2_059_052G1_scaffold_137_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25480..26562)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8Y1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99461.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Xaa-Pro aminopeptidase
L2_059_052G1_scaffold_137_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26678..27376
DNA (699bp) protein (233aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Metallophosphoesterase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LMA1_9CLOT
phosphodiesterase, family protein
L2_059_052G1_scaffold_137_28
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27449..28975)
DNA (1527bp) protein (509aa)
speE2; spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2N0_CLOA9
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L2_059_052G1_scaffold_137_29
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29015..29437)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B488_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS79755.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L2_059_052G1_scaffold_137_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29453..30577)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z8L0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13929.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
Displaying items 1-30 of 149 in total

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