ggKbase home page

L2_059_052G1_scaffold_139

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_139_1
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(169..816)
-----------------
DNA (648bp)
protein (216aa)
Radical SAM family protein n=2 Tax=Eggerthella RepID=C8WGJ3_EGGLE
radical SAM family protein
Radical SAM-linked protein {ECO:0000313|EMBL:EGC89602.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_059_052G1_scaffold_139_2
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(809..2854)
-----------------
DNA (2046bp)
protein (682aa)
Radical SAM domain protein n=2 Tax=Bacteria RepID=C8WGJ2_EGGLE
Radical SAM domain protein {ECO:0000313|EMBL:ACV55233.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
radical SAM protein
L2_059_052G1_scaffold_139_3
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2895..4031)
-----------------
DNA (1137bp)
protein (379aa)
Uncharacterized protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WGJ1_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV55232.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_059_052G1_scaffold_139_4
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4046..5239)
-----------------
DNA (1194bp)
protein (398aa)
Cell cycle protein n=3 Tax=Bacteria RepID=C8WGJ0_EGGLE
cell cycle protein
Uncharacterized protein {ECO:0000313|EMBL:KGI72348.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L2_059_052G1_scaffold_139_5
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5263..7437)
-----------------
DNA (2175bp)
protein (725aa)
Penicillin-binding protein 2 n=3 Tax=Eggerthella RepID=C8WGI9_EGGLE
Penicillin-binding protein 2 {ECO:0000313|EMBL:KGI72349.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
penicillin-binding protein 2
L2_059_052G1_scaffold_139_6
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7450..7977)
-----------------
DNA (528bp)
protein (176aa)
Rod shape-determining protein MreD n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WGI8_EGGLE
rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:ACV55229.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_059_052G1_scaffold_139_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7974..8822)
-----------------
DNA (849bp)
protein (283aa)
Cell shape-determining protein MreC n=1 Tax=Clostridium difficile F501 RepID=T4BP01_CLODI
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
rod shape-determining protein MreC
L2_059_052G1_scaffold_139_8
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8871..9926)
-----------------
DNA (1056bp)
protein (352aa)
Cell shape determining protein, MreB/Mrl family n=4 Tax=Bacteria RepID=C8WGI6_EGGLE
MreB/Mrl family cell shape determining protein
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:ACV55227.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_059_052G1_scaffold_139_9
unknown

Not on your lists

9989..10114
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

L2_059_052G1_scaffold_139_10
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10142..11434)
-----------------
DNA (1293bp)
protein (431aa)
Nickel-dependent hydrogenase large subunit n=2 Tax=Bacteria RepID=C8WGI5_EGGLE
nickel-dependent hydrogenase large subunit
Nickel-dependent hydrogenase large subunit {ECO:0000313|EMBL:ACV55226.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_059_052G1_scaffold_139_11
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11446..12231)
-----------------
DNA (786bp)
protein (262aa)
NADH ubiquinone oxidoreductase 20 kDa subunit n=4 Tax=Bacteria RepID=C8WGI4_EGGLE
NADH ubiquinone oxidoreductase 20 kDa subunit
NADH ubiquinone oxidoreductase, 20 Kd subunit {ECO:0000313|EMBL:EGC89637.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_059_052G1_scaffold_139_12
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12248..13159)
-----------------
DNA (912bp)
protein (304aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=4 Tax=Bacteria RepID=C8WGI3_EGGLE
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:KGI72355.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L2_059_052G1_scaffold_139_13
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13149..14186)
-----------------
DNA (1038bp)
protein (346aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=4 Tax=Bacteria RepID=C8WGI2_EGGLE
4Fe-4S ferredoxin
Putative sulfite reductase, subunit A {ECO:0000313|EMBL:EGC89708.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_059_052G1_scaffold_139_14
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14309..14713)
-----------------
DNA (405bp)
protein (135aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Nucleoside diphosphate kinase n=4 Tax=Bacteria RepID=C8WGI1_EGGLE
nucleoside-diphosphate kinase
L2_059_052G1_scaffold_139_15
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14902..16260)
-----------------
DNA (1359bp)
protein (453aa)
TPR repeat-containing protein n=3 Tax=Bacteria RepID=C8WGI0_EGGLE
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EGC89648.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_059_052G1_scaffold_139_16
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16307..16840)
-----------------
DNA (534bp)
protein (178aa)
Peptidyl-prolyl cis-trans isomerase cyclophilin type n=4 Tax=Bacteria RepID=C8WGH9_EGGLE
cyclophilin type peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EGC89751.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_059_052G1_scaffold_139_17
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17048..17587)
-----------------
DNA (540bp)
protein (180aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Deoxycytidine triphosphate deaminase n=4 Tax=Bacteria RepID=C8WGH8_EGGLE
deoxycytidine triphosphate deaminase
L2_059_052G1_scaffold_139_18
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17647..18990)
-----------------
DNA (1344bp)
protein (448aa)
RNA methyltransferase, TrmA family n=4 Tax=Bacteria RepID=C8WGH7_EGGLE
TrmA family RNA methyltransferase
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ACV55218.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_059_052G1_scaffold_139_19
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19543..19938)
-----------------
DNA (396bp)
protein (132aa)
GtrA-like protein n=3 Tax=Bacteria RepID=E5X660_9ACTN
GtrA-like protein {ECO:0000313|EMBL:EGC89735.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
GtrA family protein
L2_059_052G1_scaffold_139_20
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19981..22269)
-----------------
DNA (2289bp)
protein (763aa)
Histidine kinase {ECO:0000313|EMBL:ACV55216.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ACV55216.1};; Flags: Precursor;; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
Histidine kinase n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WGH5_EGGLE
histidine kinase
L2_059_052G1_scaffold_139_21
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22415..23389
-----------------
DNA (975bp)
protein (325aa)
Glycosyl transferase family 2 n=4 Tax=Bacteria RepID=C8WGH4_EGGLE
family 2 glycosyl transferase
Uncharacterized protein {ECO:0000313|EMBL:KGI72364.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L2_059_052G1_scaffold_139_22
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23655..27152)
-----------------
DNA (3498bp)
protein (1166aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
UvrD/REP helicase n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WGH3_EGGLE
UvrD/REP helicase
L2_059_052G1_scaffold_139_23
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27149..30055)
-----------------
DNA (2907bp)
protein (969aa)
ATP-dependent nuclease subunit B-like protein n=4 Tax=Eggerthella RepID=C8WGH2_EGGLE
Putative uncharacterized protein {ECO:0000313|EMBL:EGC89586.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
ATP-dependent nuclease subunit B-like protein
L2_059_052G1_scaffold_139_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30097..31035
-----------------
DNA (939bp)
protein (313aa)
EamA-like transporter family protein n=1 Tax=Clostridium difficile F501 RepID=T4C1C6_CLODI
EamA-like transporter family protein {ECO:0000313|EMBL:EQI15260.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L2_059_052G1_scaffold_139_25
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31251..32801
-----------------
DNA (1551bp)
protein (517aa)
Glycosyltransferase 28 domain protein n=3 Tax=Eggerthella RepID=C8WGH0_EGGLE
Glycosyltransferase 28 domain protein {ECO:0000313|EMBL:ACV55211.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
Glycosyltransferase 28 domain-containing protein
L2_059_052G1_scaffold_139_26
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33015..34535
-----------------
DNA (1521bp)
protein (507aa)
ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:EGC89713.1}; EC=3.6.1.- {ECO:0000313|EMBL:EGC89713.1};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
DEAD/DEAH box helicase domain protein n=3 Tax=Eggerthella RepID=C8WGG9_EGGLE
DEAD/DEAH box helicase
L2_059_052G1_scaffold_139_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34894..35184)
-----------------
DNA (291bp)
protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4BYZ5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI15257.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L2_059_052G1_scaffold_139_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35215..35586)
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4C1C2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI15255.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L2_059_052G1_scaffold_139_29
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35586..38483)
-----------------
DNA (2898bp)
protein (966aa)
FAD dependent oxidoreductase n=3 Tax=Eggerthella RepID=C8WGG6_EGGLE
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACV55207.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
FAD dependent oxidoreductase
L2_059_052G1_scaffold_139_30
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38583..38939
-----------------
DNA (357bp)
protein (119aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis protein n=4 Tax=Bacteria RepID=C8WGG5_EGGLE
dinitrogenase iron-molybdenum cofactor biosynthesis protein
Dinitrogenase iron-molybdenum cofactor {ECO:0000313|EMBL:EGC89569.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Displaying items 1-30 of 53 in total

View Taxonomy