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L2_059_052G1_scaffold_147

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_147_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1..327
DNA (327bp) protein (109aa)
UPI0003D6563B related cluster n=1 Tax=unknown RepID=UPI0003D6563B
VanW-like protein {ECO:0000313|EMBL:ETI86114.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_059_052G1_scaffold_147_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

345..3926
DNA (3582bp) protein (1194aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5B169 related cluster n=1 Tax=unknown RepID=UPI0003D5B169
DNA polymerase III
L2_059_052G1_scaffold_147_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


4071..4841
DNA (771bp) protein (257aa)
UPI0003D63338 related cluster n=1 Tax=unknown RepID=UPI0003D63338
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
30S ribosomal protein S2
L2_059_052G1_scaffold_147_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4875..5522
DNA (648bp) protein (216aa)
UPI0003D668AA related cluster n=1 Tax=unknown RepID=UPI0003D668AA
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
elongation factor Ts
L2_059_052G1_scaffold_147_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5575..6306
DNA (732bp) protein (244aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
pyrH; uridylate kinase (EC:2.7.4.22)
UPI0003D591E9 related cluster n=1 Tax=unknown RepID=UPI0003D591E9
L2_059_052G1_scaffold_147_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6299..6856
DNA (558bp) protein (186aa)
UPI0003D6679A related cluster n=1 Tax=unknown RepID=UPI0003D6679A
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ribosome recycling factor
L2_059_052G1_scaffold_147_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6853..7116
DNA (264bp) protein (88aa)
UPI0003D696C5 related cluster n=1 Tax=unknown RepID=UPI0003D696C5
Uncharacterized protein {ECO:0000313|EMBL:ETI86120.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_059_052G1_scaffold_147_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7100..7819
DNA (720bp) protein (240aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D65D04 related cluster n=1 Tax=unknown RepID=UPI0003D65D04
di-trans
L2_059_052G1_scaffold_147_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7822..8637
DNA (816bp) protein (272aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D60AB4 related cluster n=1 Tax=unknown RepID=UPI0003D60AB4
phosphatidate cytidylyltransferase
L2_059_052G1_scaffold_147_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8634..9791
DNA (1158bp) protein (386aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
UPI0003D5AED7 related cluster n=1 Tax=unknown RepID=UPI0003D5AED7
L2_059_052G1_scaffold_147_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9804..10841
DNA (1038bp) protein (346aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5B4F9 related cluster n=1 Tax=unknown RepID=UPI0003D5B4F9
RIP metalloprotease RseP
L2_059_052G1_scaffold_147_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10856..11929
DNA (1074bp) protein (358aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5A67C related cluster n=1 Tax=unknown RepID=UPI0003D5A67C
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L2_059_052G1_scaffold_147_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


11926..13641
DNA (1716bp) protein (572aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
proS; putative prolyl-tRNA synthetase (EC:6.1.1.15)
UPI0003D62869 related cluster n=1 Tax=unknown RepID=UPI0003D62869
L2_059_052G1_scaffold_147_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13746..16127
DNA (2382bp) protein (794aa)
UPI0003D65E0B related cluster n=1 Tax=unknown RepID=UPI0003D65E0B
Peptidase, U32 family {ECO:0000313|EMBL:ETI86127.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
peptidase U32
L2_059_052G1_scaffold_147_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16127..18478
DNA (2352bp) protein (784aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D62233 related cluster n=1 Tax=unknown RepID=UPI0003D62233
MutS2 family protein
L2_059_052G1_scaffold_147_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18475..19428
DNA (954bp) protein (318aa)
UPI0003D62C38 related cluster n=1 Tax=unknown RepID=UPI0003D62C38
Esterase/lipase {ECO:0000313|EMBL:ETI86129.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hydrolase
L2_059_052G1_scaffold_147_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19439..19777
DNA (339bp) protein (113aa)
UPI0003D68708 related cluster n=1 Tax=unknown RepID=UPI0003D68708
Uncharacterized protein {ECO:0000313|EMBL:ETI86130.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_059_052G1_scaffold_147_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19868..20728
DNA (861bp) protein (287aa)
UPI0003D5DA6A related cluster n=1 Tax=unknown RepID=UPI0003D5DA6A
DegV family protein {ECO:0000313|EMBL:ETI86131.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
degV family protein
L2_059_052G1_scaffold_147_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20721..22325
DNA (1605bp) protein (535aa)
UPI0003D610AD related cluster n=1 Tax=unknown RepID=UPI0003D610AD
DAK2 protein {ECO:0000313|EMBL:ETI86132.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
DAK2 domain fusion protein YloV
L2_059_052G1_scaffold_147_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22368..22856)
DNA (489bp) protein (163aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D680E2 related cluster n=1 Tax=unknown RepID=UPI0003D680E2
hypothetical protein
L2_059_052G1_scaffold_147_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22989..23417
DNA (429bp) protein (143aa)
UPI0003D67784 related cluster n=1 Tax=unknown RepID=UPI0003D67784
Uncharacterized protein {ECO:0000313|EMBL:ETI86134.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
CtsR family transcriptional regulator
L2_059_052G1_scaffold_147_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23432..23962
DNA (531bp) protein (177aa)
UPI0003D65F6A related cluster n=1 Tax=unknown RepID=UPI0003D65F6A
UvrB/UvrC protein {ECO:0000313|EMBL:ETI86135.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UvrB/UvrC protein
L2_059_052G1_scaffold_147_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23959..25032
DNA (1074bp) protein (358aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D62787 related cluster n=1 Tax=unknown RepID=UPI0003D62787
ATP:guanido phosphotransferase
L2_059_052G1_scaffold_147_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25039..27522
DNA (2484bp) protein (828aa)
UPI0003D60FC3 related cluster n=1 Tax=unknown RepID=UPI0003D60FC3
Negative regulator of genetic competence ClpC/MecB {ECO:0000313|EMBL:ETI86137.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ATPase AAA
L2_059_052G1_scaffold_147_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27611..28975
DNA (1365bp) protein (455aa)
UPI0003D5FEA2 related cluster n=1 Tax=unknown RepID=UPI0003D5FEA2
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
DNA repair protein RadA
L2_059_052G1_scaffold_147_26
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29033..30154
DNA (1122bp) protein (374aa)
UPI0003D657FD related cluster n=1 Tax=unknown RepID=UPI0003D657FD
PIN/TRAM protein {ECO:0000313|EMBL:ETI86139.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Nucleotide binding protein PINc
L2_059_052G1_scaffold_147_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30151..31320
DNA (1170bp) protein (390aa)
UPI0003D5CE5C related cluster n=1 Tax=unknown RepID=UPI0003D5CE5C
Bifunctional enzyme IspD/IspF {ECO:0000256|SAAS:SAAS00096235}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
2C-methyl-D-erythritol 2
L2_059_052G1_scaffold_147_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31317..32765
DNA (1449bp) protein (483aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5E43B related cluster n=1 Tax=unknown RepID=UPI0003D5E43B
glutamyl-tRNA synthetase
L2_059_052G1_scaffold_147_29
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32956..33735
DNA (780bp) protein (260aa)
UPI0003D59262 related cluster n=1 Tax=unknown RepID=UPI0003D59262
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ETI86142.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
family 3 extracellular solute-binding protein
L2_059_052G1_scaffold_147_30
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33799..34578
DNA (780bp) protein (260aa)
UPI0003D5A539 related cluster n=1 Tax=unknown RepID=UPI0003D5A539
Glutamine ABC transporter, periplasmic glutamine-binding protein GlnH {ECO:0000313|EMBL:ETI86143.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ABC-type transporter, periplasmic subunit family 3
Displaying items 1-30 of 57 in total

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