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L2_059_052G1_scaffold_155

Search features with annotation key words

Displaying items 1-30 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_155_1
unknown

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2..67
DNA (66bp) protein (22aa)

This feature has no annotations

L2_059_052G1_scaffold_155_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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210..542
DNA (333bp) protein (111aa)
Integrase catalytic region n=2 Tax=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) RepID=B1IPQ2_ECOLC
transposase
Integrase core domain protein {ECO:0000313|EMBL:KDX16274.1}; TaxID=1444067 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S1_C2.;"
L2_059_052G1_scaffold_155_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

865..1818
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R5D5_CITFR
Astacin family protein {ECO:0000313|EMBL:KEL82480.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_059_052G1_scaffold_155_4
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1824..2435
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWT4_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ESY62412.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
L2_059_052G1_scaffold_155_5
unknown

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comp(2673..2783)
DNA (111bp) protein (37aa)

This feature has no annotations

L2_059_052G1_scaffold_155_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2923..3444
DNA (522bp) protein (174aa)
RNA polymerase sigma factor FecI n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R1I2_CITFR
Putative RNA polymerase sigma factor fecI {ECO:0000313|EMBL:KEL82482.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
RNA polymerase sigma factor FecI
L2_059_052G1_scaffold_155_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3441..4394
DNA (954bp) protein (318aa)
FecR anti-FecI sigma factor n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QV78_CITFR
Iron dicitrate transport regulator FecR {ECO:0000313|EMBL:KJC11415.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
FecR anti-FecI sigma factor
L2_059_052G1_scaffold_155_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4481..6805
DNA (2325bp) protein (775aa)
TonB-dependent siderophore receptor n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QTD4_CITFR
Transporter {ECO:0000313|EMBL:KJC09751.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
TonB-dependent siderophore receptor
L2_059_052G1_scaffold_155_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6864..7766
DNA (903bp) protein (301aa)
ABC transporter periplasmic protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R5D9_CITFR
Fe(3+) dicitrate-binding periplasmic protein {ECO:0000313|EMBL:ETX70488.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
ABC transporter periplasmic protein
L2_059_052G1_scaffold_155_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7763..8761
DNA (999bp) protein (333aa)
ABC transporter n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWT6_CITFR
Iron-dicitrate transporter permease subunit {ECO:0000313|EMBL:KJC09749.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ABC transporter
L2_059_052G1_scaffold_155_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8758..9714
DNA (957bp) protein (319aa)
ABC transporter n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R1I7_CITFR
Fe(3+) dicitrate transport system permease fecD {ECO:0000313|EMBL:ETX70486.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
ABC transporter
L2_059_052G1_scaffold_155_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9715..10482
DNA (768bp) protein (256aa)
ABC transporter-like protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QV82_CITFR
Iron ABC transporter {ECO:0000313|EMBL:KJC11420.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ABC transporter-like protein
L2_059_052G1_scaffold_155_13
Shewanella denitrificans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11136..11927
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R5E4_CITFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE56556.1}; TaxID=318161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013).;"
L2_059_052G1_scaffold_155_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12078..12299)
DNA (222bp) protein (74aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=C1M374_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC10069.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_052G1_scaffold_155_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12397..12600
DNA (204bp) protein (68aa)
Acetyltransferase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R1J3_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX70473.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
acetyltransferase
L2_059_052G1_scaffold_155_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12845..14161
DNA (1317bp) protein (439aa)
Shikimate transporter n=5 Tax=Citrobacter RepID=J1G7E9_9ENTR
shikimate transporter
H+ symporter family protein {ECO:0000313|EMBL:KEL82493.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L2_059_052G1_scaffold_155_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14280..15734
DNA (1455bp) protein (485aa)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
AMP nucleosidase (EC:3.2.2.4)
AMP nucleosidase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UW83_9ENTR
L2_059_052G1_scaffold_155_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15751..17529
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R5E8_CITFR
Metallopeptidase M24 family protein {ECO:0000313|EMBL:KEL82495.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
X-Pro aminopeptidase
L2_059_052G1_scaffold_155_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17585..19018)
DNA (1434bp) protein (478aa)
PTS system protein n=3 Tax=Citrobacter freundii RepID=K8QWU5_CITFR
PTS system glucose-specific transporter subunits IIBC {ECO:0000313|EMBL:BAO18611.1}; Flags: Fragment;; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
PTS glucose-specific subunit IIBC
L2_059_052G1_scaffold_155_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19312..20109)
DNA (798bp) protein (266aa)
Metallodependent hydrolase n=5 Tax=Citrobacter RepID=J0M3K6_9ENTR
DNAse {ECO:0000313|EMBL:KJC11428.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNAse
L2_059_052G1_scaffold_155_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20120..21124)
DNA (1005bp) protein (335aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III subunit delta n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QV90_CITFR
DNA polymerase III subunit delta {ECO:0000313|EMBL:ETX70467.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_059_052G1_scaffold_155_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21121..21762)
DNA (642bp) protein (214aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Thymidylate kinase n=5 Tax=Citrobacter RepID=J0MA96_9ENTR
thymidylate kinase
L2_059_052G1_scaffold_155_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21752..22774)
DNA (1023bp) protein (341aa)
Protein YceG n=5 Tax=Citrobacter RepID=J0VW75_9ENTR
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ETX70465.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
aminodeoxychorismate lyase
L2_059_052G1_scaffold_155_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22777..23586)
DNA (810bp) protein (270aa)
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KEL82501.1}; EC=4.1.3.38 {ECO:0000313|EMBL:KEL82501.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
4-amino-4-deoxychorismate lyase (EC:4.1.3.38)
Aminodeoxychorismate lyase n=4 Tax=Citrobacter RepID=J1G7J6_9ENTR
L2_059_052G1_scaffold_155_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23722..24930)
DNA (1209bp) protein (403aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
3-oxoacyl-ACP synthase (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=9 Tax=Citrobacter RepID=C1M364_9ENTR
L2_059_052G1_scaffold_155_26
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24931..25167)
DNA (237bp) protein (79aa)
Acyl carrier protein n=2202 Tax=cellular organisms RepID=ACP1_SHIFL
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=913083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Uganda str. R8-3404.;"
L2_059_052G1_scaffold_155_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25228..25962)
DNA (735bp) protein (245aa)
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KJC11435.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KJC11435.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=6 Tax=Citrobacter RepID=C1M362_9ENTR
L2_059_052G1_scaffold_155_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25975..26904)
DNA (930bp) protein (310aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DJA9_CITFR
malonyl CoA-ACP transacylase
L2_059_052G1_scaffold_155_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26920..27873)
DNA (954bp) protein (318aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
3-oxoacyl-ACP synthase (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=4 Tax=Citrobacter RepID=C1M360_9ENTR
L2_059_052G1_scaffold_155_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27951..29000)
DNA (1050bp) protein (350aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate acyltransferase; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Phosphate acyltransferase n=4 Tax=Citrobacter RepID=M3CBK6_CITFR
phosphate acyltransferase
Displaying items 1-30 of 192 in total

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