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L2_059_052G1_scaffold_172

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_172_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1124..1396)
DNA (273bp) protein (91aa)
Uncharacterized protein n=77 Tax=Escherichia RepID=Q1REJ5_ECOUT
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH90842.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_059_052G1_scaffold_172_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1350..2465)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=E4PA86_ECO8N
hypothetical protein
TPR domain-containing protein {ECO:0000313|EMBL:CKH90819.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_059_052G1_scaffold_172_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2705..3574)
DNA (870bp) protein (290aa)
sucD; succinate-CoA ligase, alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1324 Tax=Enterobacteriaceae RepID=SUCD_ECO57
L2_059_052G1_scaffold_172_4
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3574..4740)
DNA (1167bp) protein (389aa)
sucC; Succinyl-CoA ligase (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1331 Tax=Enterobacteriaceae RepID=SUCC_ECO24
L2_059_052G1_scaffold_172_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5002..6219)
DNA (1218bp) protein (406aa)
sucB; dihydrolipoamide succinyltransferase (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61 {ECO:0000313|EMBL:CAR06902.1};; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
Dihydrolipoyllysine-residue succinyltransferase component n=119 Tax=Escherichia RepID=E2QIA0_ECOLX
L2_059_052G1_scaffold_172_6
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6234..9035)
DNA (2802bp) protein (934aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate decarboxylase, thiamin-requiring {ECO:0000313|EMBL:CAQ89886.1}; EC=1.2.4.2 {ECO:0000313|EMBL:CAQ89886.1};; TaxID=585054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73).;"
2-oxoglutarate dehydrogenase E1 component n=8 Tax=Escherichia coli RepID=E2QI99_ECOLX
L2_059_052G1_scaffold_172_7
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9454..10170)
DNA (717bp) protein (239aa)
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
Succinate dehydrogenase n=1180 Tax=Enterobacteriaceae RepID=C3TIN2_ECOLX
L2_059_052G1_scaffold_172_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10186..11952)
DNA (1767bp) protein (589aa)
succinate dehydrogenase, flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
Succinate dehydrogenase flavoprotein subunit n=1198 Tax=Enterobacteriaceae RepID=DHSA_ECO57
L2_059_052G1_scaffold_172_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11952..12299)
DNA (348bp) protein (116aa)
Succinate dehydrogenase hydrophobic membrane anchor subunit n=1105 Tax=Enterobacteriaceae RepID=DHSD_ECOL6
sdhD; succinate dehydrogenase cytochrome b556 small subunit
Succinate dehydrogenase hydrophobic membrane anchor subunit {ECO:0000313|EMBL:EOV80348.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L2_059_052G1_scaffold_172_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12293..12697)
DNA (405bp) protein (135aa)
Succinate dehydrogenase cytochrome b556 subunit n=1 Tax=Escherichia coli HVH 79 (4-2512823) RepID=T6JUF6_ECOLX
sdhC; succinate dehydrogenase cytochrome b556 large subunit
Succinate dehydrogenase cytochrome b556 subunit {ECO:0000313|EMBL:EOU74772.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
L2_059_052G1_scaffold_172_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13391..14674
DNA (1284bp) protein (428aa)
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase n=1084 Tax=Enterobacteriaceae RepID=CISY_ECOL6
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
L2_059_052G1_scaffold_172_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14822..15064
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 3 (4-7276001) RepID=T5MRA7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU16128.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L2_059_052G1_scaffold_172_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15348..16394
DNA (1047bp) protein (349aa)
Protein abrB n=327 Tax=Escherichia RepID=E2QI92_ECOLX
abrB; transport protein AbrB
Membrane AbrB duplication domain protein {ECO:0000313|EMBL:EHU43989.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L2_059_052G1_scaffold_172_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16391..17182)
DNA (792bp) protein (264aa)
Endonuclease 8 {ECO:0000255|HAMAP-Rule:MF_01253}; DNA glycosylase/AP lyase Nei {ECO:0000255|HAMAP-Rule:MF_01253}; EC=3.2.2.- {ECO:0000255|HAMAP-Rule:MF_01253};; EC=4.2.99.18 {ECO:0000255|HAMAP-Rule:MF_01253};; DNA-(apurinic or apyrimidinic site) lyase Nei {ECO:0000255|HAMAP-Rule:MF_01253}; Endonuclease VIII {ECO:0000255|HAMAP-Rule:MF_01253}; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Endonuclease 8 n=188 Tax=Escherichia RepID=END8_ECOL5
endonuclease VIII
L2_059_052G1_scaffold_172_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17218..17952)
DNA (735bp) protein (245aa)
UPF0271 protein YbgL n=178 Tax=Escherichia coli RepID=YBGL_ECOL6
ybgL; LamB/YcsF family protein
UPF0271 protein YbgL {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_059_052G1_scaffold_172_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17942..18874)
DNA (933bp) protein (311aa)
Uncharacterized protein ybgK n=26 Tax=Escherichia coli RepID=E2QI89_ECOLX
ybgK; hypothetical protein
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:EOX01813.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_059_052G1_scaffold_172_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18868..19524)
DNA (657bp) protein (219aa)
Uncharacterized protein ybgJ n=4 Tax=Escherichia coli RepID=E2QI88_ECOLX
ybgJ; hypothetical protein
Putative hydrolase subunit {ECO:0000313|EMBL:CAR06889.1}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L2_059_052G1_scaffold_172_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19547..20290)
DNA (744bp) protein (248aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
Putative GTP cyclohydrolase 1 type 2 n=1216 Tax=Enterobacteriaceae RepID=GTPC1_ECO57
ybgI; metal-binding protein
L2_059_052G1_scaffold_172_19
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20561..22042
DNA (1482bp) protein (494aa)
Dipeptide permease D n=318 Tax=Escherichia RepID=E2QI86_ECOLX
ybgH; transporter
Dipeptide permease D {ECO:0000256|HAMAP-Rule:MF_01880}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_059_052G1_scaffold_172_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22084..23502)
DNA (1419bp) protein (473aa)
Deoxyribodipyrimidine photo-lyase n=4 Tax=Escherichia coli RepID=E2QI85_ECOLX
phr; Deoxyribodipyrimidine photo-lyase
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:ESD32721.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_059_052G1_scaffold_172_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23499..24008)
DNA (510bp) protein (170aa)
Uncharacterized protein ybgA n=5 Tax=Escherichia coli RepID=E2QI84_ECOLX
ybgA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ53966.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_059_052G1_scaffold_172_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24109..24315)
DNA (207bp) protein (69aa)
Uncharacterized protein ybfA n=319 Tax=Escherichia RepID=E2QI83_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU18397.1}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L2_059_052G1_scaffold_172_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24717..26390
DNA (1674bp) protein (558aa)
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Potassium-transporting ATPase A chain n=3 Tax=Escherichia coli RepID=E2QI82_ECOLX
L2_059_052G1_scaffold_172_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26413..28461
DNA (2049bp) protein (683aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
kdpB; potassium-transporting ATPase B chain (EC:3.6.3.10)
Potassium-transporting ATPase B chain n=185 Tax=Escherichia coli RepID=ATKB_ECO27
L2_059_052G1_scaffold_172_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28470..29042
DNA (573bp) protein (191aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
Potassium-transporting ATPase C chain n=11 Tax=Escherichia coli RepID=ATKC_ECO81
kdpC; Potassium-transporting ATPase C chain
L2_059_052G1_scaffold_172_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29035..31719
DNA (2685bp) protein (895aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Sensor protein kdpD n=6 Tax=Escherichia coli RepID=E2QI79_ECOLX
kdpD; sensor protein KdpD
L2_059_052G1_scaffold_172_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31716..32393
DNA (678bp) protein (226aa)
KDP operon transcriptional regulatory protein kdpE n=324 Tax=Escherichia RepID=E2QI78_ECOLX
kdpE; DNA-binding transcriptional activator KdpE
KDP operon transcriptional regulatory protein KdpE {ECO:0000313|EMBL:EGI16731.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L2_059_052G1_scaffold_172_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33082..35280
DNA (2199bp) protein (733aa)
Ornithine decarboxylase, inducible {ECO:0000313|EMBL:ABE06188.1}; EC=4.1.1.17 {ECO:0000313|EMBL:ABE06188.1};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Ornithine decarboxylase, inducible n=155 Tax=Escherichia RepID=E2QI77_ECOLX
ornithine decarboxylase
L2_059_052G1_scaffold_172_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35277..36596
DNA (1320bp) protein (440aa)
Putrescine-ornithine antiporter n=10 Tax=Escherichia coli RepID=E2QI76_ECOLX
potE; Putrescine-ornithine antiporter
Putrescine-ornithine antiporter {ECO:0000313|EMBL:ESD32736.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_059_052G1_scaffold_172_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36653..38293)
DNA (1641bp) protein (547aa)
pgm; phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase {ECO:0000313|EMBL:AJO82569.1}; EC=5.4.2.2 {ECO:0000313|EMBL:AJO82569.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Phosphoglucomutase n=223 Tax=Escherichia RepID=E2QI75_ECOLX
Displaying items 1-30 of 54 in total

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