ggKbase home page

L2_059_052G1_scaffold_182

Search features with annotation key words

Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_182_1
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..768)
DNA (768bp) protein (256aa)
ATP/GTP-binding protein n=4 Tax=Enterobacteriaceae RepID=S5HUB2_SALET
ATP-dependent OLD family endonuclease
Uncharacterized protein {ECO:0000313|EMBL:EHS88018.1}; TaxID=883120 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5245.;"
L2_059_052G1_scaffold_182_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1830..2756)
DNA (927bp) protein (309aa)
Uncharacterized protein n=42 Tax=Enterobacteriaceae RepID=M8JV44_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EMU67328.1}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
hypothetical protein
L2_059_052G1_scaffold_182_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2768..4324)
DNA (1557bp) protein (519aa)
TnsD n=119 Tax=Enterobacteriaceae RepID=J9ZH96_ECO14
TnsD
TniQ family protein {ECO:0000313|EMBL:EMX35607.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L2_059_052G1_scaffold_182_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4365..5813)
DNA (1449bp) protein (483aa)
Tn7-like transposition protein TnsC n=200 Tax=Enterobacteriaceae RepID=B7L5W7_ECO55
Tn7 transposition protein C
Archaeal ATPase family protein {ECO:0000313|EMBL:KDX40142.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
L2_059_052G1_scaffold_182_5
Enterobacter sp. 35699, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5813..7936)
DNA (2124bp) protein (708aa)
Tn7-like transposition protein TnsB n=156 Tax=Enterobacteriaceae RepID=B7L5X1_ECO55
Tn7 transposition protein B {ECO:0000313|EMBL:KJN22329.1}; TaxID=1619248 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35699.;"
Tn7 transposition protein B
L2_059_052G1_scaffold_182_6
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7923..8765)
DNA (843bp) protein (281aa)
Tn7-like transposase TnsA n=214 Tax=Enterobacteriaceae RepID=B7L5X0_ECO55
transposase
Putative transposase {ECO:0000313|EMBL:GAB51763.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L2_059_052G1_scaffold_182_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8908..10110)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QVF5_CITFR
Membrane protein {ECO:0000313|EMBL:KKB87182.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_059_052G1_scaffold_182_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10340..11839
DNA (1500bp) protein (500aa)
Phosphate transporter n=6 Tax=Citrobacter RepID=J0M5X1_9ENTR
Inorganic phosphate transporter 1 {ECO:0000313|EMBL:ETX67431.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
phosphate transporter PitA
L2_059_052G1_scaffold_182_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11904..12239)
DNA (336bp) protein (112aa)
Universal stress protein B n=12 Tax=Enterobacteriaceae RepID=C1MDH5_9ENTR
universal stress protein UspB
Universal stress protein B {ECO:0000256|HAMAP-Rule:MF_01088, ECO:0000256|SAAS:SAAS00025222}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L2_059_052G1_scaffold_182_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12632..13069
DNA (438bp) protein (146aa)
Universal stress protein n=12 Tax=Enterobacteriaceae RepID=C1MDH6_9ENTR
universal stress global response regulator UspA
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L2_059_052G1_scaffold_182_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13351..14823
DNA (1473bp) protein (491aa)
Dipeptide and tripeptide permease B n=6 Tax=Citrobacter RepID=J1G3I5_9ENTR
Dipeptide and tripeptide permease B {ECO:0000256|HAMAP-Rule:MF_01879}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
tppB; peptide ABC transporter permease
L2_059_052G1_scaffold_182_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14872..15375)
DNA (504bp) protein (168aa)
Rrf2 family protein n=8 Tax=Citrobacter RepID=C1MDH8_9ENTR
Predicted transcriptional regulator of NADH dehydrogenase, Rrf2 family {ECO:0000313|EMBL:CDL36041.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L2_059_052G1_scaffold_182_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15608..16807
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R3Z6_CITFR
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KJC05207.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_052G1_scaffold_182_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16913..17662)
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073131}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073130};; 16S rRNA m2G1516 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; Ribosomal RNA small subunit methyltransferase J; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Ribosomal RNA small subunit methyltransferase J n=2 Tax=Citrobacter RepID=M3DK95_CITFR
putative methyltransferase
L2_059_052G1_scaffold_182_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17797..19839)
DNA (2043bp) protein (681aa)
Oligopeptidase A {ECO:0000313|EMBL:KEL79979.1}; EC=3.4.24.70 {ECO:0000313|EMBL:KEL79979.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Oligopeptidase A n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QTT3_CITFR
oligopeptidase A
L2_059_052G1_scaffold_182_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20048..20890
DNA (843bp) protein (281aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Ribosomal RNA large subunit methyltransferase J n=6 Tax=Citrobacter RepID=J1G3I8_9ENTR
hypothetical protein
L2_059_052G1_scaffold_182_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20995..22347
DNA (1353bp) protein (451aa)
Glutathione-disulfide reductase {ECO:0000313|EMBL:KEL79977.1}; EC=1.8.1.7 {ECO:0000313|EMBL:KEL79977.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
glutathione reductase (EC:1.8.1.7)
Glutathione reductase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CCJ9_CITFR
L2_059_052G1_scaffold_182_18
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22525..22656
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HDV3_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:EIQ78945.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
hypothetical protein
L2_059_052G1_scaffold_182_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22880..24274)
DNA (1395bp) protein (465aa)
Cytochrome C peroxidase n=3 Tax=Citrobacter RepID=K8QS11_CITFR
Cytochrome C peroxidase {ECO:0000313|EMBL:ETX61480.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L2_059_052G1_scaffold_182_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24702..26351
DNA (1650bp) protein (550aa)
Cytoplasmic trehalase {ECO:0000256|HAMAP-Rule:MF_01059}; EC=3.2.1.28 {ECO:0000256|HAMAP-Rule:MF_01059};; Alpha,alpha-trehalase {ECO:0000256|HAMAP-Rule:MF_01059}; Alpha,alpha-trehalose glucohydrolase {ECO:0000256|HAMAP-Rule:MF_01059}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
treF; trehalase (EC:3.2.1.28)
Cytoplasmic trehalase n=2 Tax=Citrobacter RepID=K8QTS9_CITFR
L2_059_052G1_scaffold_182_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26379..27968)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R038_CITFR
Membrane protein {ECO:0000313|EMBL:KJC03883.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_059_052G1_scaffold_182_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28136..28675
DNA (540bp) protein (180aa)
Protein YnaD n=2 Tax=Citrobacter freundii RepID=K8QVE3_CITFR
GCN5 family acetyltransferase {ECO:0000313|EMBL:KJC03884.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
GCN5 family acetyltransferase
L2_059_052G1_scaffold_182_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28762..29112
DNA (351bp) protein (117aa)
Phage-like lysozyme n=2 Tax=Citrobacter freundii RepID=K8R3Y8_CITFR
Lysozyme {ECO:0000313|EMBL:KJC05298.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_052G1_scaffold_182_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29131..29733)
DNA (603bp) protein (201aa)
Putative DNA-binding response regulator in two-component regulatory system n=2 Tax=Citrobacter freundii RepID=K8QS06_CITFR
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJC05216.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
LuxR family transcriptional regulator
L2_059_052G1_scaffold_182_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30095..30943)
DNA (849bp) protein (283aa)
Protein YcgG n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QTS5_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC11694.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ycgG; protein YcgG
L2_059_052G1_scaffold_182_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31143..31583)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R033_CITFR
Membrane protein {ECO:0000313|EMBL:KJC05218.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_052G1_scaffold_182_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32106..32864)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase reductase sdr n=6 Tax=Citrobacter RepID=J1G3J8_9ENTR
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC05219.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
short-chain dehydrogenase/reductase SDR
L2_059_052G1_scaffold_182_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32984..33883
DNA (900bp) protein (300aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8R3Y4_CITFR
Transcriptional regulator {ECO:0000313|EMBL:KJC05220.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
L2_059_052G1_scaffold_182_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33931..34956
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QS02_CITFR
Inner membrane protein YhjD {ECO:0000313|EMBL:CDL39453.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
membrane protein
L2_059_052G1_scaffold_182_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35307..36629
DNA (1323bp) protein (441aa)
Inner membrane metabolite transporter yhjE n=10 Tax=Citrobacter RepID=C1MDJ5_9ENTR
Inner membrane metabolite transporter yhjE {ECO:0000313|EMBL:ETX61489.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
transporter
Displaying items 1-30 of 134 in total

View Taxonomy