ggKbase home page

L2_059_052G1_scaffold_185

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_185_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56..1036
DNA (981bp) protein (327aa)
Nucleoside hydrolase, IUNH family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPM6_CLOPF
Nucleoside hydrolase, IUNH family {ECO:0000313|EMBL:EDT16227.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
nucleoside hydrolase, IUNH family
L2_059_052G1_scaffold_185_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1055..1612
DNA (558bp) protein (186aa)
Putative membrane protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RED5_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT27697.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_059_052G1_scaffold_185_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1630..2319
DNA (690bp) protein (230aa)
Radical SAM domain protein n=4 Tax=Clostridium perfringens RepID=B1BIL5_CLOPF
Radical SAM domain protein {ECO:0000313|EMBL:EDT16342.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
radical SAM domain-containing protein
L2_059_052G1_scaffold_185_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2482..2739
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XIW3_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81706.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_052G1_scaffold_185_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3650..4660
DNA (1011bp) protein (337aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CY25_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16402.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_052G1_scaffold_185_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4677..5726
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RED9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27704.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_059_052G1_scaffold_185_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5939..7207)
DNA (1269bp) protein (423aa)
Aminopeptidase n=7 Tax=Clostridium perfringens RepID=H7CY23_CLOPF
aminopeptidase
Aminopeptidase {ECO:0000313|EMBL:EIA16400.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_052G1_scaffold_185_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7257..7772)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIW7_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81702.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_052G1_scaffold_185_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8011..8928
DNA (918bp) protein (306aa)
glutaminase (EC:3.5.1.2)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Glutaminase 2 n=10 Tax=Clostridium perfringens RepID=GLSA2_CLOPE
L2_059_052G1_scaffold_185_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9348..11948
DNA (2601bp) protein (867aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
DNA polymerase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIW9_CLOPE
polA; DNA polymerase I
L2_059_052G1_scaffold_185_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11965..12564
DNA (600bp) protein (200aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Dephospho-CoA kinase n=8 Tax=Clostridium perfringens RepID=COAE_CLOPE
L2_059_052G1_scaffold_185_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12574..13119
DNA (546bp) protein (182aa)
Transglycosylase, SLT family n=2 Tax=Clostridium perfringens RepID=Q0TNW9_CLOP1
Slt family transglycosylase
Transglycosylase, SLT family {ECO:0000313|EMBL:EDT25343.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_059_052G1_scaffold_185_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13144..14286
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIX2_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81697.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_059_052G1_scaffold_185_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14572..15168
DNA (597bp) protein (199aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=B1R373_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27762.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_052G1_scaffold_185_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15291..16211
DNA (921bp) protein (307aa)
Hydrolase, alpha/beta fold family n=2 Tax=Clostridium perfringens RepID=Q0TNX2_CLOP1
alpha/beta hydrolase
Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:EDT72800.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_059_052G1_scaffold_185_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16332..17267
DNA (936bp) protein (312aa)
Tetratricopeptide repeat protein n=7 Tax=Clostridium perfringens RepID=Q0TNX3_CLOP1
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDT27796.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_052G1_scaffold_185_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17382..19274
DNA (1893bp) protein (631aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Sensor histidine kinase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIM7_CLOPF
sensor histidine kinase
L2_059_052G1_scaffold_185_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19264..21300
DNA (2037bp) protein (679aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Sensor histidine kinase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLC6_CLOPF
sensor histidine kinase
L2_059_052G1_scaffold_185_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21346..21843
DNA (498bp) protein (166aa)
TspO/MBR family protein n=1 Tax=Clostridium perfringens F262 RepID=H7CY11_CLOPF
TspO/MBR family protein {ECO:0000313|EMBL:EIA16388.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
TspO/MBR family protein
L2_059_052G1_scaffold_185_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22006..23163
DNA (1158bp) protein (386aa)
Putative amidohydrolase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLC4_CLOPF
Putative amidohydrolase {ECO:0000313|EMBL:EIA16387.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
amidohydrolase
L2_059_052G1_scaffold_185_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23391..25553
DNA (2163bp) protein (721aa)
DNA topoisomerase III-like protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIY0_CLOPE
DNA topoisomerase III-like protein {ECO:0000313|EMBL:BAB81689.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
topB; DNA topoisomerase
L2_059_052G1_scaffold_185_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25622..26077)
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BIN2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS80456.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_059_052G1_scaffold_185_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26175..26885)
DNA (711bp) protein (237aa)
LrgB-like family protein n=4 Tax=Clostridium perfringens RepID=Q0TNY0_CLOP1
lrgB-like family protein
LrgB-like family protein {ECO:0000313|EMBL:EDT16367.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_052G1_scaffold_185_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26878..27255)
DNA (378bp) protein (126aa)
LrgA family protein n=8 Tax=Clostridium perfringens RepID=Q0TNY1_CLOP1
LrgA family protein
LrgA family protein {ECO:0000313|EMBL:EDT27816.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_052G1_scaffold_185_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27367..28185)
DNA (819bp) protein (273aa)
TPR repeat-containing protein n=6 Tax=Clostridium perfringens RepID=H7CY05_CLOPF
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:EIA16382.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_052G1_scaffold_185_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28311..29321)
DNA (1011bp) protein (337aa)
asnA; asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Aspartate--ammonia ligase n=4 Tax=Clostridium perfringens RepID=ASNA_CLOPE
L2_059_052G1_scaffold_185_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29911..30555
DNA (645bp) protein (215aa)
pyrophosphatase PpaX (EC:3.6.1.1)
HAD-superfamily hydrolase, subfamily IA n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R360_CLOPF
HAD-superfamily hydrolase, subfamily IA {ECO:0000313|EMBL:EDT25228.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_059_052G1_scaffold_185_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30610..31881)
DNA (1272bp) protein (424aa)
D-alanyl-D-alanine carboxypeptidase family protein n=4 Tax=Clostridium perfringens RepID=H7CY02_CLOPF
dacF; D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EIA16457.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_059_052G1_scaffold_185_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32060..32626
DNA (567bp) protein (189aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BPV3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16252.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_052G1_scaffold_185_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32796..32951
DNA (156bp) protein (52aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CY00_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16259.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Displaying items 1-30 of 48 in total

View Taxonomy