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L2_059_052G1_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_232_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..262
DNA (261bp) protein (87aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D5B039 related cluster n=1 Tax=unknown RepID=UPI0003D5B039
DNA gyrase subunit beta
L2_059_052G1_scaffold_232_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

620..2137
DNA (1518bp) protein (506aa)
UPI0003D5C749 related cluster n=1 Tax=unknown RepID=UPI0003D5C749
Lysine-specific permease {ECO:0000313|EMBL:ETI86750.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
lysine-specific permease
L2_059_052G1_scaffold_232_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2299..3354
DNA (1056bp) protein (352aa)
UPI0003D5CDF6 related cluster n=1 Tax=unknown RepID=UPI0003D5CDF6
RND membrane fusion protein {ECO:0000313|EMBL:ETI86749.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
efflux transporter
L2_059_052G1_scaffold_232_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3351..6401
DNA (3051bp) protein (1017aa)
UPI0003D5F145 related cluster n=1 Tax=unknown RepID=UPI0003D5F145
RND efflux transporter, hydrophobe/amphiphile efflux-1 family {ECO:0000313|EMBL:ETI86748.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
acriflavin resistance protein
L2_059_052G1_scaffold_232_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6829..8034
DNA (1206bp) protein (402aa)
UPI0003D5BFC5 related cluster n=1 Tax=unknown RepID=UPI0003D5BFC5
Sodium/proton antiporter, CPA1 family {ECO:0000313|EMBL:ETI86747.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
sodium/proton antiporter, CPA1 family (TC 2.A.36)
L2_059_052G1_scaffold_232_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8414..9766)
DNA (1353bp) protein (451aa)
UPI0003D6466E related cluster n=1 Tax=unknown RepID=UPI0003D6466E
CBS/transporter associated protein {ECO:0000313|EMBL:ETI86746.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_059_052G1_scaffold_232_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9912..10688
DNA (777bp) protein (259aa)
RNA-dirted RNA polymerase (EC:2.7.7.6)
UPI0003D5C2C5 related cluster n=1 Tax=unknown RepID=UPI0003D5C2C5
Exported protein PHISTb {ECO:0000313|EMBL:ETI86745.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_059_052G1_scaffold_232_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10746..11939
DNA (1194bp) protein (398aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D6459F related cluster n=1 Tax=unknown RepID=UPI0003D6459F
DNA polymerase IV
L2_059_052G1_scaffold_232_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11936..13075
DNA (1140bp) protein (380aa)
UPI0003D5C2D5 related cluster n=1 Tax=unknown RepID=UPI0003D5C2D5
Peptidase M20 {ECO:0000313|EMBL:KGF11959.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
peptidase T-like protein
L2_059_052G1_scaffold_232_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13910..14227
DNA (318bp) protein (106aa)
UPI0003D5F3A7 related cluster n=1 Tax=unknown RepID=UPI0003D5F3A7
AzlC family protein {ECO:0000313|EMBL:ETI86742.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
putative branched-chain amino acid permease (azaleucine resistance)
L2_059_052G1_scaffold_232_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14224..14607
DNA (384bp) protein (128aa)
UPI0003D65B70 related cluster n=1 Tax=unknown RepID=UPI0003D65B70
AzlC family protein {ECO:0000313|EMBL:ETI86741.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
AzlC family protein
L2_059_052G1_scaffold_232_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14601..14930
DNA (330bp) protein (110aa)
UPI0003D658A7 related cluster n=1 Tax=unknown RepID=UPI0003D658A7
Uncharacterized protein {ECO:0000313|EMBL:ETI86740.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_059_052G1_scaffold_232_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14976..16847)
DNA (1872bp) protein (624aa)
UPI0003D65249 related cluster n=1 Tax=unknown RepID=UPI0003D65249
Amino acid transporter {ECO:0000313|EMBL:KGF11962.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L2_059_052G1_scaffold_232_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17191..18351
DNA (1161bp) protein (387aa)
UPI0003D60E74 related cluster n=1 Tax=unknown RepID=UPI0003D60E74
Uncharacterized protein {ECO:0000313|EMBL:ETI86674.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_059_052G1_scaffold_232_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18357..18938
DNA (582bp) protein (194aa)
cobA; putative cob(I)alamin adenosyltransferase (EC:2.5.1.17)
UPI0003D66AE5 related cluster n=1 Tax=unknown RepID=UPI0003D66AE5
Uncharacterized protein {ECO:0000313|EMBL:ETI86675.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_059_052G1_scaffold_232_16
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18953..19861
DNA (909bp) protein (303aa)
UPI0003D63B62 related cluster n=1 Tax=unknown RepID=UPI0003D63B62
Uncharacterized protein {ECO:0000313|EMBL:KGF11965.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
L2_059_052G1_scaffold_232_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19864..20259
DNA (396bp) protein (132aa)
UPI0003D5EFB8 related cluster n=1 Tax=unknown RepID=UPI0003D5EFB8
Sporulation protein YtfJ {ECO:0000313|EMBL:ETI86677.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
sporulation protein YtfJ
L2_059_052G1_scaffold_232_18
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20341..20751
DNA (411bp) protein (137aa)
UPI0003D5DA2C related cluster n=1 Tax=unknown RepID=UPI0003D5DA2C
Uncharacterized protein {ECO:0000313|EMBL:KGF11967.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
outer membrane chaperone Skp (OmpH)
L2_059_052G1_scaffold_232_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21159..21551
DNA (393bp) protein (131aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L-aspartate 1-decarboxylase (EC:4.1.1.11)
UPI0003D660AB related cluster n=1 Tax=unknown RepID=UPI0003D660AB
L2_059_052G1_scaffold_232_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21606..22457
DNA (852bp) protein (284aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
pantothenate synthetase (EC:6.3.2.1)
UPI0003D60C4F related cluster n=1 Tax=unknown RepID=UPI0003D60C4F
L2_059_052G1_scaffold_232_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22454..23431
DNA (978bp) protein (326aa)
UPI0003D6734D related cluster n=1 Tax=unknown RepID=UPI0003D6734D
Uncharacterized protein {ECO:0000313|EMBL:ETI86681.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Predicted Na+-dependent transporter
L2_059_052G1_scaffold_232_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23481..23867)
DNA (387bp) protein (129aa)
UPI0003D68851 related cluster n=1 Tax=unknown RepID=UPI0003D68851
Uncharacterized protein {ECO:0000313|EMBL:ETI88152.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_059_052G1_scaffold_232_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23888..25045)
DNA (1158bp) protein (386aa)
UPI0003D62E2B related cluster n=1 Tax=unknown RepID=UPI0003D62E2B
Cyanate transporter {ECO:0000313|EMBL:ETI88153.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
cyanate transporter
L2_059_052G1_scaffold_232_24
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25272..27722
DNA (2451bp) protein (817aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
DNA gyrase subunit A n=1 Tax=Dialister sp. CAG:588 RepID=R7PRJ8_9FIRM
DNA gyrase subunit alpha
L2_059_052G1_scaffold_232_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28116..28385
DNA (270bp) protein (90aa)
UPI0003D6644B related cluster n=1 Tax=unknown RepID=UPI0003D6644B
Uncharacterized protein {ECO:0000313|EMBL:ETI86243.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L2_059_052G1_scaffold_232_26
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28552..29355
DNA (804bp) protein (268aa)
UPI0003D5EA4D related cluster n=1 Tax=unknown RepID=UPI0003D5EA4D
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ETI86242.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA
L2_059_052G1_scaffold_232_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29509..30348
DNA (840bp) protein (280aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5EE1D related cluster n=1 Tax=unknown RepID=UPI0003D5EE1D
modification methylase LlaDCHIA
L2_059_052G1_scaffold_232_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30566..31684
DNA (1119bp) protein (373aa)
UPI0003D67BC5 related cluster n=1 Tax=unknown RepID=UPI0003D67BC5
Uncharacterized protein {ECO:0000313|EMBL:ETI86240.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_059_052G1_scaffold_232_29
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31953..32762)
DNA (810bp) protein (270aa)
UPI0003D5EB08 related cluster n=1 Tax=unknown RepID=UPI0003D5EB08
Zeta toxin {ECO:0000313|EMBL:ETI86239.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L2_059_052G1_scaffold_232_30
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32743..33021)
DNA (279bp) protein (93aa)
UPI0003D68D7B related cluster n=1 Tax=unknown RepID=UPI0003D68D7B
Uncharacterized protein {ECO:0000313|EMBL:ETI86238.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Displaying items 1-30 of 42 in total

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