ggKbase home page

L2_059_052G1_scaffold_312

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_312_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190..786
DNA (597bp) protein (199aa)
Cyclic diguanylate phosphodiesterase domain-containing protein n=3 Tax=Citrobacter RepID=J0MAJ0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL82417.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
putative signal transduction protein
L2_059_052G1_scaffold_312_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

956..1153
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UUK4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC12632.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_052G1_scaffold_312_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1185..1961)
DNA (777bp) protein (259aa)
Lipopolysaccharide core biosynthesis protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QU34_CITFR
Lipopolysaccharide core biosynthesis protein {ECO:0000313|EMBL:KJC09100.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Lipopolysaccharide core biosynthesis protein RfaZ
L2_059_052G1_scaffold_312_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2385..4472)
DNA (2088bp) protein (696aa)
Bifunctional enterobactin receptor adhesin protein n=3 Tax=Citrobacter RepID=J1G7S8_9ENTR
Outer membrane insertion C-terminal signal domain protein {ECO:0000313|EMBL:KEL82415.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
bifunctional enterobactin receptor/adhesin protein
L2_059_052G1_scaffold_312_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4904..6490
DNA (1587bp) protein (529aa)
Substrate-binding transport protein n=5 Tax=Citrobacter RepID=M3DI67_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX70583.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
nickel ABC transporter substrate-binding protein
L2_059_052G1_scaffold_312_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6490..7464
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QXM0_CITFR
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEL82413.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
peptide ABC transporter permease
L2_059_052G1_scaffold_312_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7454..8266
DNA (813bp) protein (271aa)
Nickel transport system permease protein 2 n=6 Tax=Citrobacter RepID=J1G7L7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX70585.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
peptide ABC transporter permease
L2_059_052G1_scaffold_312_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8260..9054
DNA (795bp) protein (265aa)
ABC transport ATP-binding protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QU41_CITFR
ABC transporter family protein {ECO:0000313|EMBL:KEL82411.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
peptide ABC transporter ATP-binding protein
L2_059_052G1_scaffold_312_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9038..9628
DNA (591bp) protein (197aa)
Atp-binding protein of abc transport system n=3 Tax=Citrobacter RepID=J1G7T2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX70587.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
peptide ABC transporter ATP-binding protein
L2_059_052G1_scaffold_312_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9718..10368
DNA (651bp) protein (217aa)
Metal-binding protein n=3 Tax=Citrobacter RepID=J0VWF5_9ENTR
Metal-binding protein ZinT {ECO:0000313|EMBL:ETX70588.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
zinc-binding protein
L2_059_052G1_scaffold_312_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10508..11146
DNA (639bp) protein (213aa)
Leucine efflux protein n=2 Tax=Citrobacter RepID=R8VGH1_9ENTR
Leucine efflux protein {ECO:0000313|EMBL:ETX70589.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
leucine export protein LeuE
L2_059_052G1_scaffold_312_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11321..11683
DNA (363bp) protein (121aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1M3M1_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX64507.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L2_059_052G1_scaffold_312_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11687..11869
DNA (183bp) protein (61aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=K8QU48_CITFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJC09108.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_059_052G1_scaffold_312_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12050..12730
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8UTT0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX70592.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_059_052G1_scaffold_312_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12783..14930)
DNA (2148bp) protein (716aa)
Formate dehydrogenase {ECO:0000313|EMBL:KJC09467.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KJC09467.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
formate dehydrogenase (EC:1.2.1.2)
Formate dehydrogenase, alpha subunit n=1 Tax=Citrobacter sp. KTE30 RepID=R8UTN4_9ENTR
L2_059_052G1_scaffold_312_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15291..15539
DNA (249bp) protein (83aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=J0MAK7_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJC09109.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_059_052G1_scaffold_312_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15812..16837)
DNA (1026bp) protein (342aa)
GAF sensor-containing diguanylate cyclase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QPI0_CITFR
Putative diguanylate cyclase YeaP {ECO:0000313|EMBL:KEL82398.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
diguanylate cyclase
L2_059_052G1_scaffold_312_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17024..17272
DNA (249bp) protein (83aa)
Hemolysin n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QU53_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL82397.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_059_052G1_scaffold_312_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17280..17627)
DNA (348bp) protein (116aa)
Transcriptional family n=6 Tax=Citrobacter RepID=J1G7U9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL82396.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_059_052G1_scaffold_312_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17805..18512
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=M3DI54_CITFR
CTP synthase {ECO:0000313|EMBL:ETX70598.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_052G1_scaffold_312_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18549..19736)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QXP0_CITFR
Inner membrane transporter YeaN {ECO:0000313|EMBL:ETX70599.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_059_052G1_scaffold_312_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19836..20654
DNA (819bp) protein (273aa)
Transcriptional family n=6 Tax=Citrobacter RepID=J1G7N1_9ENTR
AraC family transcriptional regulator {ECO:0000313|EMBL:ETX70600.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_052G1_scaffold_312_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20611..21057)
DNA (447bp) protein (149aa)
UPF0756 membrane protein CSAG_01006 n=5 Tax=Citrobacter RepID=C1M3N2_9ENTR
UPF0756 membrane protein YeaL {ECO:0000256|HAMAP-Rule:MF_01874}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L2_059_052G1_scaffold_312_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21196..21699)
DNA (504bp) protein (168aa)
Prolyl-tRNA synthetase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QN25_CITFR
Prolyl-tRNA synthetase {ECO:0000313|EMBL:ETX70602.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_052G1_scaffold_312_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21743..23233)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QKQ7_CITFR
Diguanylate cylase {ECO:0000313|EMBL:KJC09118.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
diguanylate cylase
L2_059_052G1_scaffold_312_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23397..24167
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QXQ5_CITFR
Methyltransferase domain protein {ECO:0000313|EMBL:KEL82389.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_059_052G1_scaffold_312_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24233..25516)
DNA (1284bp) protein (428aa)
UPF0229 protein WC1_01702 n=6 Tax=Citrobacter RepID=R8UUM1_9ENTR
UPF0229 protein P834_06322 {ECO:0000256|HAMAP-Rule:MF_01232}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_052G1_scaffold_312_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25638..27572)
DNA (1935bp) protein (645aa)
Uncharacterized protein n=9 Tax=Bacteria RepID=C1M3N7_9ENTR
Serine protein kinase {ECO:0000313|EMBL:ETX64523.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
serine/threonine protein kinase
L2_059_052G1_scaffold_312_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28006..28752
DNA (747bp) protein (249aa)
MltA-interacting MipA family protein n=5 Tax=Citrobacter RepID=J1G7Y2_9ENTR
MltA-interacting protein MipA {ECO:0000313|EMBL:CDL39873.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
MltA-interacting protein MipA
L2_059_052G1_scaffold_312_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28912..29766
DNA (855bp) protein (285aa)
Aldo/keto reductase n=2 Tax=Citrobacter RepID=M3DI46_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC09166.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
Displaying items 1-30 of 32 in total

View Taxonomy