ggKbase home page

L2_059_052G1_scaffold_320

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_320_1
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1..330
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002895A06
Contig000071, whole genome shotgun sequence {ECO:0000313|EMBL:KIS15276.1}; TaxID=1381082 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. zooepidemicus Sz4is.;"
L2_059_052G1_scaffold_320_2
Anaerococcus hydrogenalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

676..2088
DNA (1413bp) protein (471aa)
Putative aspartate ammonia-lyase n=1 Tax=Anaerococcus hydrogenalis ACS-025-V-Sch4 RepID=F0H1L7_9FIRM
Putative aspartate ammonia-lyase {ECO:0000313|EMBL:EGC83583.1}; TaxID=879306 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus hydrogenalis ACS-025-V-Sch4.;"
fumarate lyase
L2_059_052G1_scaffold_320_3
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2098..3459
DNA (1362bp) protein (454aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vaginalis ATCC 51170.;"
fumarate hydratase n=1 Tax=Anaerococcus obesiensis RepID=UPI000309DAE4
fumarate lyase
L2_059_052G1_scaffold_320_4
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3731..4390)
DNA (660bp) protein (220aa)
Phosphorylated carbohydrates phosphatase TM_1254 {ECO:0000313|EMBL:CRH74531.1}; EC=3.1.3.- {ECO:0000313|EMBL:CRH74531.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
HAD hydrolase, family IA, variant 3 n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GXA0_9FIRM
HAD-superfamily hydrolase
L2_059_052G1_scaffold_320_5
Alloiococcus otitis, Alloiococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4401..5375)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Bavariicoccus seileri RepID=UPI0003B5DB9F
Uncharacterized protein {ECO:0000313|EMBL:EKU93912.1}; TaxID=883081 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Alloiococcus.;" source="Alloiococcus otitis ATCC 51267.;"
histidinol phosphatase
L2_059_052G1_scaffold_320_6
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(5368..5820)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BIS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65033.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
L2_059_052G1_scaffold_320_7
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5958..6497
DNA (540bp) protein (180aa)
Chromate transporter n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RF95_ANAPD
chromate transporter
Chromate transporter {ECO:0000313|EMBL:ACV28156.1}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
L2_059_052G1_scaffold_320_8
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6490..7050
DNA (561bp) protein (187aa)
chromate transporter n=1 Tax=Anaerococcus sp. PH9 RepID=UPI00031E88AC
Chromate transport protein {ECO:0000313|EMBL:EGC81549.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065-V-Col13.;"
chromate transporter
L2_059_052G1_scaffold_320_9
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7197..8117
DNA (921bp) protein (307aa)
ribosylpyrimidine nucleosidase (EC:3.2.2.8)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Solobacterium moorei F0204 RepID=E7MMB7_9FIRM
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:EFW24772.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
L2_059_052G1_scaffold_320_10
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8534..9484)
DNA (951bp) protein (317aa)
Bile acid:sodium symporter n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RFA7_ANAPD
bile acid:sodium symporter
Bile acid:sodium symporter {ECO:0000313|EMBL:ACV28168.1}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
L2_059_052G1_scaffold_320_11
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9486..10325)
DNA (840bp) protein (280aa)
pantoate/beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
Pantothenate synthetase n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RFA8_ANAPD
L2_059_052G1_scaffold_320_12
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10385..10768)
DNA (384bp) protein (128aa)
aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
aspartate decarboxylase n=1 Tax=Anaerococcus sp. PH9 RepID=UPI00030B3DD9
L2_059_052G1_scaffold_320_13
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11317..13989)
DNA (2673bp) protein (891aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EGC81566.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EGC81566.1};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065-V-Col13.;"
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GX93_9FIRM
calcium-translocating P-type ATPase
L2_059_052G1_scaffold_320_14
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14447..15751
DNA (1305bp) protein (435aa)
Respiratory-chain NADH dehydrogenase 51 Kd subunit n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FY40_9FIRM
Respiratory-chain NADH dehydrogenase 51 Kd subunit {ECO:0000313|EMBL:EEA85587.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
prdC; electron transfer protein
L2_059_052G1_scaffold_320_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15763..16185
DNA (423bp) protein (141aa)
D-proline reductase proprotein prdA {ECO:0000313|EMBL:CCL31514.1}; EC=1.21.4.1 {ECO:0000313|EMBL:CCL31514.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
D-proline reductase proprotein prdA n=1 Tax=Clostridium difficile CD69 RepID=T3A0N7_CLODI
prdA; proline reductase subunit proprotein
L2_059_052G1_scaffold_320_16
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16317..18233
DNA (1917bp) protein (639aa)
D-proline reductase proprotein PrdA {ECO:0000313|EMBL:KDR95288.1}; EC=1.21.4.1 {ECO:0000313|EMBL:KDR95288.1};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
prdA; D-proline reductase proprotein prdA [Contains: D-proline reductase subunit beta (D-proline reductase 45 kDa subunit); D-proline reductase subunit alpha (D-proline reductase 23 kDa subunit)] (EC:1.21.4.1)
proline reductase n=1 Tax=Lactobacillus versmoldensis RepID=UPI0002491A7C
L2_059_052G1_scaffold_320_17
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18226..18462
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYD5_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EET85756.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
L2_059_052G1_scaffold_320_18
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18462..19178
DNA (717bp) protein (239aa)
prdB; D-proline reductase, PrdB subunit (EC:1.21.4.1)
D-proline reductase, 26 kDa subunit @ selenocysteine-containing n=1 Tax=Lactobacillus salivarius cp400 RepID=V6DMH7_9LACO
D-proline reductase, 26 kDa subunit @ selenocysteine-containing {ECO:0000313|EMBL:CDK35959.1}; TaxID=1273133 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius cp400.;"
L2_059_052G1_scaffold_320_19
Oribacterium sinus, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19430..20437
DNA (1008bp) protein (336aa)
Proline racemase {ECO:0000313|EMBL:EEJ51528.1}; EC=5.1.1.4 {ECO:0000313|EMBL:EEJ51528.1};; TaxID=585501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sinus F0268.;"
Proline racemase n=1 Tax=Oribacterium sinus F0268 RepID=C2KXG6_9FIRM
prdF; proline racemase
L2_059_052G1_scaffold_320_20
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20448..21395
DNA (948bp) protein (316aa)
Uncharacterized protein n=3 Tax=Peptostreptococcus RepID=D3MRA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKX93227.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
hypothetical protein
L2_059_052G1_scaffold_320_21
unknown

Not on your lists

21698..21808
DNA (111bp) protein (37aa)

This feature has no annotations

L2_059_052G1_scaffold_320_22
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21881..22825
DNA (945bp) protein (315aa)
Uncharacterized protein n=3 Tax=Peptostreptococcus RepID=D3MRA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKX93227.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
hypothetical protein
L2_059_052G1_scaffold_320_23
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23059..23841
DNA (783bp) protein (261aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Dorea sp. CAG:105 RepID=R5DA20_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:CCX75654.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
(R)-hydroxyglutaryl-CoA dehydratase activator
L2_059_052G1_scaffold_320_24
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23829..24980
DNA (1152bp) protein (384aa)
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SQP9_9FIRM
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:CDC59844.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
2-hydroxyacyl-CoA dehydratase subunit beta
L2_059_052G1_scaffold_320_25
Anaerococcus tetradius, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24994..26007
DNA (1014bp) protein (338aa)
Selenide, water dikinase {ECO:0000313|EMBL:EEI81948.1}; EC=2.7.9.3 {ECO:0000313|EMBL:EEI81948.1};; TaxID=525255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus tetradius ATCC 35098.;"
selenide, water dikinase (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CKI3_9FIRM
L2_059_052G1_scaffold_320_26
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26022..26630
DNA (609bp) protein (203aa)
SirA family protein n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RG05_ANAPD
SirA family protein
SirA family protein {ECO:0000313|EMBL:ACV28416.1}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
L2_059_052G1_scaffold_320_27
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26611..26889
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RG04_ANAPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV28415.1}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
L2_059_052G1_scaffold_320_28
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26876..28018
DNA (1143bp) protein (381aa)
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase {ECO:0000313|EMBL:ACV28414.1}; EC=2.8.1.7 {ECO:0000313|EMBL:ACV28414.1};; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
Cysteine desulfurase n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RG03_ANAPD
L2_059_052G1_scaffold_320_29
Gemella bergeri, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28082..29323
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Gemella bergeriae ATCC 700627 RepID=U2QR70_9BACL
Uncharacterized protein {ECO:0000313|EMBL:ERK58709.1}; TaxID=1321820 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella bergeriae ATCC 700627.;"
D-proline reductase
L2_059_052G1_scaffold_320_30
Gemella bergeri, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29435..30682
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Gemella bergeriae ATCC 700627 RepID=U2QR70_9BACL
Uncharacterized protein {ECO:0000313|EMBL:ERK58709.1}; TaxID=1321820 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella bergeriae ATCC 700627.;"
D-proline reductase
Displaying 30 items

View Taxonomy